Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03878 ATGAACAACAGTTATAGTGATAGAGGCAATGATACTTCTGATGAAAGTCATAGTCAAGATAACAATGATGTGGGTAATCAGAATGAGGCAACGGACGAAGATTTAACATATGAACAGTATAAAAGTATAATAGACCTAACTGCGAATGACATCCGAGGTATGGAGTTTGGTAGTAAAGAGCATGCATGTAAATTTTATGATTCATATGCTAGGTGTCATGGCTTTGTTGCAAGAAAAGATGATATTAAACGTGATGCGCAAGTCAATATTATAATGCGTCAATTGGTTTGCAACAAAGAGGGTTTGAGAAATAAAAAGCACTTTATAAGGTTGGATAGAAAGAGACCTCATAGGCCAATCACTCGTACTAGTTGTCAAGCTAAGCTTAGAGTACACTTTGATTACAAGAGATCAAAATGGACAGTCTTGTCCTTTGTGGAGACTCATAATCATTATTTATGTCCACCAAAATATAGACACTTAATCCCTGCCCATCGCAAGATGGGTGAAGATAAAGCTCAAGCGGACAATTTGCATTCCTATGGAGTTAGGATTTGTCACATTATGGGATATATGTTGGCTCAGAAAGGTGGGTATAGTGCTTTAGGGTTCACCAAAAAGGATATGTACAATTATTTTAGTGAGAAAAACCGTGAGAAGATCAAAGATGGGGATGCATGCATTGCATTAGGTTATTTACAAGGCAAGGCAGATAATAATGGATTGATGCATTCATCATATTCATTTACAAGTGATGGTAAATTGAAGAATTTGTTCTGGGCAGATGAAGTTAGTAGAAGTGATTTTCAGTGCTTTGGTGATGTTCTAGCATTTGACACCACTTAA 846 0.3652 MNNSYSDRGNDTSDESHSQDNNDVGNQNEATDEDLTYEQYKSIIDLTANDIRGMEFGSKEHACKFYDSYARCHGFVARKDDIKRDAQVNIIMRQLVCNKEGLRNKKHFIRLDRKRPHRPITRTSCQAKLRVHFDYKRSKWTVLSFVETHNHYLCPPKYRHLIPAHRKMGEDKAQADNLHSYGVRICHIMGYMLAQKGGYSALGFTKKDMYNYFSEKNREKIKDGDACIALGYLQGKADNNGLMHSSYSFTSDGKLKNLFWADEVSRSDFQCFGDVLAFDTT. 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03878 281 PANTHER OS01G0519700 PROTEIN 51 277 - -
Seca7g03878 281 Pfam FAR1 DNA-binding domain 64 154 IPR004330 -
Seca7g03878 281 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03878 Seca-Chr7 115770680 115771525 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g03878 FAR1 3e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03878 - - ccaj:109792835 333.569