Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03863 ATGTGGATTGTTTCAGGCAGAAGATTCTGGAACTTTTCGAGATTTGCTGGGGACTGTACGAACGGACGCGCGGGAAAGTTGCCGGAGCGGATTTCTGATATCTCTGAGTCTTGTGCTCAGATGGTGCTTCAGTTGCACAATCAAATTGAGGTGGTTACGGGTAGTCCCAGTGGCGCTGTGGCGGCTGAAGCTAGATGGAGTGGTTCCCATTGGGTCATACTGGACAAGAAATTAAAGCAAGAGGTGAAGCATTGCATGGATGAACTAAACTGTAACATTGTGGTGATGAATGGCTCTCAGCCAAAAGTCCTCAGGCTTAACTTAGGATCCTCCGATGAACTCCAAACTCCTTTTTTCTCTGCTGCTTCTTCGCCAGGCATAGAAATTGGAAAGCTAAAAGGGCGCAGATTGAAGCATTCCACCCCAGTAAGTAGCCCTGAAGAAGCAGAAGCAGGTACTTCTGTTACAAGAAACACAGGAGCAAATTCAGTGTCAAGTTCTGACTCAACGACTTCTCCTTTCCTAGTCTATGAACAAAACCCCCTATACGAGGGTCAGGGACCACAGAAAAGAACAGACAAACCAATCAACGAGCCAAAAGATTTCAACGTCCATCCACCATTGTACTCTGATTTGGAAAAGGATCGTCTACCCCTTTTGTGGACACGCCCAACATCGTCTGTGGCTAGTGATAGCAAGACTTTATTTTGGATTCATCAAAACCACATTATGAATGAAAAACCTCAGAAAGCTGAAAGCAGAATTATCCAAAGAACTAAATCCCCAACTTCTAAAACCTTACTAGAGAATTTTATACATGGTGATCAAGAGATGAGAGCAGATGAACTTGGGTTTAACCAAGCTCAAAGTAGAAGTTATGTTAAAAACTCGGGAATAAAAAATGATTCCATTCCTTTGGGCAGAACTTCCTCTATTCCTCCTCCCTTATGCTCACAGTGTCAGAATAAAGCACCAGTATTCGGAAAGCCTCCTAGACGGTTTTCTTACAAAGAGCTAGAGGAAGCTACAGACATGTTCTCAGATGTGAATTTTTTGGCTGAAGGTGGATTTGGTGTAGTTCACAAGGGAATACTCAAAGATGGCCAGGTTGTTGCAGTGAAACAGTTAAAGTTTAGTGGCTCTCAAGCAGATATTGATTTCTGCAGGGAAGTTCGGGTTTTGAGCTGTGCTCAACACAGAAATGTTGTATTGTTGATAGGATTTTGTACAGAAGGCAATTTGAGGATTTTAGTCTATGAGTACATATGTAACGGATCCTTGGACCTCTGCTTACATGGAGAAGAGAGTTTACCGTTGGATTGGAACTCCCGCTTAAGGATAGCAATTGGAGTTGCACGAGGCTTACGCTACCTCCATGAAGATTGTAGAGTTGGTTGTATAGTGCACAGAGACCTTCGACCCAAAAATATCCTCTTAACCCATGATTTTGAACCTCTGGTGGCTGATTTTGGGCTTGCTAGATGGCACTCAGAATGGAATATAAATACTGAAGATCGCGTTATAGGAACTTCAGGGTACCTTGCACCGGAGTATCTTGAGGCTGGAAATCTAACATATAAAGTAGATGTATATGCATTTGGAATTGTTTTATTGGAGTTAATAACCGGTCGAAGGATTAGTGAGCTGGAACAGTTTAATGGACACTCCTATATTTCTGAATGGTTTCACCCCATACGCATGTTAGAGCCCACTCATATCATACAAAACGTTCGATCTCTTAACCCGTGCTTGGATTCTGAGGCGTCACTGGAATTTAATCTGCAATTGCAAGCCATGGCACGAGCTGCTTCATTGTGTCTACGTCTGGATCCTGATGCCAGACCCCCAATGTCAAAGATCCTCAGAGTGCTGGAAGGGGGCGATCCAGCAGGTCCTATGGGTTTAGACATCAATTCAGTTGGCAACAGAAGTGGCCATTTAAGTGGTTTGACTTCGCACACTCCACCTAAAAGTACAGTAAGCCATTCTCGTAGGCTATCACATTGA 2007 0.4355 MWIVSGRRFWNFSRFAGDCTNGRAGKLPERISDISESCAQMVLQLHNQIEVVTGSPSGAVAAEARWSGSHWVILDKKLKQEVKHCMDELNCNIVVMNGSQPKVLRLNLGSSDELQTPFFSAASSPGIEIGKLKGRRLKHSTPVSSPEEAEAGTSVTRNTGANSVSSSDSTTSPFLVYEQNPLYEGQGPQKRTDKPINEPKDFNVHPPLYSDLEKDRLPLLWTRPTSSVASDSKTLFWIHQNHIMNEKPQKAESRIIQRTKSPTSKTLLENFIHGDQEMRADELGFNQAQSRSYVKNSGIKNDSIPLGRTSSIPPPLCSQCQNKAPVFGKPPRRFSYKELEEATDMFSDVNFLAEGGFGVVHKGILKDGQVVAVKQLKFSGSQADIDFCREVRVLSCAQHRNVVLLIGFCTEGNLRILVYEYICNGSLDLCLHGEESLPLDWNSRLRIAIGVARGLRYLHEDCRVGCIVHRDLRPKNILLTHDFEPLVADFGLARWHSEWNINTEDRVIGTSGYLAPEYLEAGNLTYKVDVYAFGIVLLELITGRRISELEQFNGHSYISEWFHPIRMLEPTHIIQNVRSLNPCLDSEASLEFNLQLQAMARAASLCLRLDPDARPPMSKILRVLEGGDPAGPMGLDINSVGNRSGHLSGLTSHTPPKSTVSHSRRLSH. 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03863 668 PANTHER OS01G0750732 PROTEIN 94 626 - -
Seca7g03863 668 MobiDBLite consensus disorder prediction 146 177 - -
Seca7g03863 668 MobiDBLite consensus disorder prediction 641 668 - -
Seca7g03863 668 Gene3D Transferase(Phosphotransferase) domain 1 422 629 - -
Seca7g03863 668 MobiDBLite consensus disorder prediction 131 204 - -
Seca7g03863 668 SUPERFAMILY Protein kinase-like (PK-like) 326 624 IPR011009 -
Seca7g03863 668 Gene3D Phosphorylase Kinase; domain 1 314 421 - -
Seca7g03863 668 Pfam Protein tyrosine and serine/threonine kinase 352 580 IPR001245 GO:0004672|GO:0006468
Seca7g03863 668 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 318 421 - -
Seca7g03863 668 FunFam Os07g0541700 protein 422 510 - -
Seca7g03863 668 SMART tyrkin_6 346 624 IPR020635 GO:0004713|GO:0006468
Seca7g03863 668 MobiDBLite consensus disorder prediction 632 668 - -
Seca7g03863 668 ProSiteProfiles Protein kinase domain profile. 346 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03863 668 ProSitePatterns Tyrosine protein kinases specific active-site signature. 467 479 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03863 Seca-Chr7 115436120 115441677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03863 321 620 Trihelix Transcription Factor Family AT1G68690 45.183 1.35e-74 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Seca7g03863 PK_Tyr_Ser-Thr 8.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03863 - - gmx:100813141 1146.72