Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03858 ATGGCCTTGGAGTCGAAAGACACTGTGTATTTCGATGAAGAAGCCGAGTGTGCCCGTGCTGCCGTCAATGAAGTTTTGAACATGTTCGATGGGTTGTTAGCCAGGCTTCCAGAGAGTGAAAGAGCAGCTTTGCAAAGGTCTATGGGTCTCAAGATTGAACAATTGAAAGCTGAACTCCAACAATTGAATGAGAATTTACGACCAGAAATCCCAAGGTGTTGTCCAAGTGCCTTAGGAAATATCATGAGGAAATGTTGGGATGCAAATCCAAACAAGCGTCCAGAAATGGATGAGGTGGTGAGAATGCTAGAAGCAATTGATACTACCAATGGTGGTGGAATGATACCTGAAGACCAGACTACAGGTTGCTTTTGTTTTGCCCTAACCCGTGGTCCATAA 399 0.4461 MALESKDTVYFDEEAECARAAVNEVLNMFDGLLARLPESERAALQRSMGLKIEQLKAELQQLNENLRPEIPRCCPSALGNIMRKCWDANPNKRPEMDEVVRMLEAIDTTNGGGMIPEDQTTGCFCFALTRGP. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03858 132 Pfam Protein tyrosine and serine/threonine kinase 59 103 IPR001245 GO:0004672|GO:0006468
Seca7g03858 132 Gene3D Transferase(Phosphotransferase) domain 1 25 114 - -
Seca7g03858 132 PANTHER F14O23.11 PROTEIN 1 64 - -
Seca7g03858 132 SUPERFAMILY Protein kinase-like (PK-like) 59 107 IPR011009 -
Seca7g03858 132 Coils Coil 45 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03858 Seca-Chr7 115326739 115328348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03858 64 132 MAP Kinase Kinase Kinase AT4G14780 73.913 1.11e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Seca7g03858 PK_Tyr_Ser-Thr 7.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03858 - K01968 gmx:100820513 137.502