Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03855 ATGTTCACTAATTCACACCAAGTAATGAGAACCTTACTATCATCACCTTTGTCAGAGCCAGACCTCTCCTTAAACATTAGCCCTCCCTCTATTTCAGAAGCCAAAGATGTTGTGTGCTCATCAACCTCTGATTCAGGGAGTAGTGGAAGTGAGTTAAGCCATGAGAATATTGGGTTTTTCCATCGTCAACACACCACATTGAGATTAGGCTTTGCAGATTTGAATCATCATCATCCTCATTCACTACAAGGAGCCTCAACAAGAAACTTCAACCACCATCTCCAACCTCAAATCTATGGACGAGATTTCAAACGAAATGCAAGGGTCAACATGAATGGTGTGAAAAGAAGTGTCAGAGCTCCTAGGATGAGATGGACAACCACCCTCCATGCCCATTTTGTTCATGCCGTTCAGCTTCTTGGTGGCCATGAAAGGGCAACACCAAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCACAGGTCATGGGCAGACAGATATAGGCTTAAACCCAAGACCAGGAAATAATATTGTTCATCATCATCTGCATGGACCATTAGCTTCTCAGAGACCCAATTTATTATTACCACAAAATTCTCACAGGACATCATGGCAATCATCAAGAGAGACAAATACAAACAATAGTGGACAAAAATCCGAAATCGGTTTGCCGTATTCACATCTCAAGGGAAATGATACCATGGTGGATGAGAAGAATTATGGAGGCCTATCAAATTGCACGAAGGAGAGGTTGGATTCTACCCCTTTGTCACGTTCCGAGACGATTATTGACTTAGAATTCACACTAGGAAGGCCCAGTTGGAAAACAGAGCATGCTGATCAATCATCAAGAGAGTTAACTCTTCTCAAGTGTTAA 942 0.4214 MFTNSHQVMRTLLSSPLSEPDLSLNISPPSISEAKDVVCSSTSDSGSSGSELSHENIGFFHRQHTTLRLGFADLNHHHPHSLQGASTRNFNHHLQPQIYGRDFKRNARVNMNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTGHGQTDIGLNPRPGNNIVHHHLHGPLASQRPNLLLPQNSHRTSWQSSRETNTNNSGQKSEIGLPYSHLKGNDTMVDEKNYGGLSNCTKERLDSTPLSRSETIIDLEFTLGRPSWKTEHADQSSRELTLLKC. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03855 313 SUPERFAMILY Homeodomain-like 118 175 IPR009057 -
Seca7g03855 313 FunFam Myb family transcription factor 119 177 - -
Seca7g03855 313 MobiDBLite consensus disorder prediction 220 243 - -
Seca7g03855 313 MobiDBLite consensus disorder prediction 220 249 - -
Seca7g03855 313 NCBIfam myb-like DNA-binding domain, SHAQKYF class 121 174 IPR006447 GO:0003677
Seca7g03855 313 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 20 300 IPR044847 GO:0000976|GO:0006355|GO:0010158
Seca7g03855 313 Gene3D - 120 177 - -
Seca7g03855 313 Pfam Myb-like DNA-binding domain 122 173 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03855 Seca-Chr7 115205632 115210316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03855 18 198 G2-like Transcription Factor Family AT5G42630 60.753 8.27e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca7g03855 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03855 - - gmx:100778242 378.252