Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03850 ATGGCCATAACGGACTACTTCCCCGGCGACATCGCCTCCGATCTCTGGAAAATGCTAATAAACATTTCGTGCAAGACTCTCAATTGCAGAGCAAGCGCAGAGCAACTCATCACCTACGTCCATGAAATCCTTCCCACAATCGAAGAAATCAAATACTCCGGCGTCGAGCTTCCGGCGCCTCGCCAGTCTCAGCTCAATCACCTCTCCGAGATTCTCCGCTCAGGCGTCGAGCTCTCTCACAAGGTCCTCTCCTCTAGCCGCTGGAACGTCTACAGGAACTTCCAACTCGCCATGAAGATGGAGAAGCTTGAGAAGAGCGTCACCGAGTTCTTGCAAGTTCCCATGCAGGCTCATATACTTGCTGATGTGCACCACACTCGGTTCGAGATGGCCGAACGGTTTGACCGGCTCGAAGCCTCGAACCGGAGGATGGAGCAGTTCTTTTGCGCCATGAAGATTGGGGTTGGTGGGGGTGGGTGGGTGGAGGAGGCTGTTAAGAGTATGCAGGAAGATGAGACTTGGATTGAGGGTGGTTCTGGAAATTTGAGTGTTGGTTTGGATTTTGGGAAGAGTAAGGTTAAGGAGATGATTTTTGGAAGACAGGACCTTTGGGTTGTTGGGATTTCTGGGGTTGGTGGATCAGGGAAAACCACTCTTGCTAGAGAAGTCTGCAGAGATGACCAAGTTCGATGTTATTTCAAGGAGAGAATCTTGTTTCTGACTGTCTCTCAATCCCCAAATGTGGAGCAGCTGAGAGCTACCATCTGGGGACACATCATGGGCAGTAACGGAAGCTTTAATCCCAATTATGCTGTTCCGCAGTACATGCCACAATTTGAGTGTAGAAGCCAAGCTCAAATCCTGATTGTTCTAGATGATGTATGGTCACTCTCTGTGCTAGAGCAGCTTGTCTTTAGAATACCTGGTTGCAAATTCCTTGTGGTGTCCAGGTTCAGGTTCCCAATTTTTAATGCCACTTATGTAGTGGAATTGCTGAATGAAGAGGATGCCCTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATCCCTTCATATGCTAATCAGAATTTAGTCAAGCAGGTTGTGGCTGAGTGTGGAAGGCTTCCACTGGCTCTTAAAGTGATTGGAGCTTCTTTGCGAGATCAGACTGAAATGTTTTGGTTAAGTGTTAAAACAAGGCTTTCTCAAGGCCTAAGCATAGGTGAATCCTATGAACTCAACCTGATAGATCGAATGGCAATCAGTACTAATTACTTGCCAGGAAAGATCAAAGAATGCTTCATGGACCTGTGTTCGTTTCCAGAGGATAAAAAGATTCCTCTGGAAGTTCTTATCAATATGTGGGTTGAAATCCATGATATTCATGAAACGGAAGCTTATGCCATTGTGGTAGAGCTTTCAAACAAGAATCTTCTCACCTTACTGAAAGAGGCACGTGCTGGGGGTATGTATAGCAGTTGCTTTGAAATTTCTGTTACTCAGCATGATATACTGAGAGACCTAGCTCTTAATTTGAGCAATCGTGGGAGCATCCATGGACGCCAAAGATTAGTAATGCCAAAACGAGAAGAGAATGGAAGACTCCCTAAAGAGTGGTCAAGATACATGGACCAACCTTTTGAAGCTCAAATTGTTTCAATTCACACAGGTGAAATGAAAGAATGGGACTGGTGTAAACTGGAATTTCCCAGGGCTGAAGTCCTGATTATTAACTTCACATCCAATGAATACTTCTTACCTCCATTCATTGAGAGAATGCCAAATTTGAGGGCATTAATAGTGATAAACCACAGTGCTTCATATGCTCATCTTCACAATGTTTCAGTTTTCAAGAATTTGACCAACTTGAGGAGCCTCTGGCTTGAAAAAGTTTCCATCCCCCATTTATCAGGCATTGTCTTGGAGAACTTGGGCAAATTATTTGTAGTCCTTTGTAAGATTAACAACAGTTTGGAGGGGAAAGAAGCAAACCTAGCTCAAATCTTCCCTAACCTCTCTGAGTTCACTCTTGATCATTGTGATGATGTCACTGAGTTACCTTCAAGCATTTGTAGAATACAGTCACTCAAGAATTTGAGTCTCACCAACTGCCACAATTTGACCCAACTACCTGTTAAATTAGGCACTCTAAGATCTCTAGAGATCCTCCGTTTATATGCCTGTCCACATTTGGAAACACTTCCACCTAGCATCTGTGACATGAGCAGATTGAAGTACATTGACATTTCTCAATGTGTTAACCTAGCATGCTTCCCTGAAGGAATTGGTAAATTGGTAAGCTTAGAAAAGATTGACATGAGGGAATGTCCAGTTAGGAAATTACCAAAATCTGCAGTGTCATTGCAGTCTCTGCAGCTTGTAATTTGTGATGAGGAGGTATCTTGGATATGGAAAGAAGTTGAGAAGGCCAAGCCAAATGTCCATATTCAAGTATCAGAGCAGCAATTTGATCTAGACTGGCTTAAAGAGTGA 2478 0.4391 MAITDYFPGDIASDLWKMLINISCKTLNCRASAEQLITYVHEILPTIEEIKYSGVELPAPRQSQLNHLSEILRSGVELSHKVLSSSRWNVYRNFQLAMKMEKLEKSVTEFLQVPMQAHILADVHHTRFEMAERFDRLEASNRRMEQFFCAMKIGVGGGGWVEEAVKSMQEDETWIEGGSGNLSVGLDFGKSKVKEMIFGRQDLWVVGISGVGGSGKTTLAREVCRDDQVRCYFKERILFLTVSQSPNVEQLRATIWGHIMGSNGSFNPNYAVPQYMPQFECRSQAQILIVLDDVWSLSVLEQLVFRIPGCKFLVVSRFRFPIFNATYVVELLNEEDALSLFCHHAFGQKSIPSYANQNLVKQVVAECGRLPLALKVIGASLRDQTEMFWLSVKTRLSQGLSIGESYELNLIDRMAISTNYLPGKIKECFMDLCSFPEDKKIPLEVLINMWVEIHDIHETEAYAIVVELSNKNLLTLLKEARAGGMYSSCFEISVTQHDILRDLALNLSNRGSIHGRQRLVMPKREENGRLPKEWSRYMDQPFEAQIVSIHTGEMKEWDWCKLEFPRAEVLIINFTSNEYFLPPFIERMPNLRALIVINHSASYAHLHNVSVFKNLTNLRSLWLEKVSIPHLSGIVLENLGKLFVVLCKINNSLEGKEANLAQIFPNLSEFTLDHCDDVTELPSSICRIQSLKNLSLTNCHNLTQLPVKLGTLRSLEILRLYACPHLETLPPSICDMSRLKYIDISQCVNLACFPEGIGKLVSLEKIDMRECPVRKLPKSAVSLQSLQLVICDEEVSWIWKEVEKAKPNVHIQVSEQQFDLDWLKE. 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03850 825 SUPERFAMILY RNI-like 564 790 - -
Seca7g03850 825 Gene3D - 331 409 IPR042197 -
Seca7g03850 825 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Seca7g03850 825 PRINTS Disease resistance protein signature 281 295 - -
Seca7g03850 825 PRINTS Disease resistance protein signature 686 702 - -
Seca7g03850 825 PRINTS Disease resistance protein signature 205 220 - -
Seca7g03850 825 PRINTS Disease resistance protein signature 367 381 - -
Seca7g03850 825 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 5 823 IPR039203 GO:0050832
Seca7g03850 825 Gene3D - 412 503 IPR036388 -
Seca7g03850 825 Gene3D Ribonuclease Inhibitor 541 809 IPR032675 -
Seca7g03850 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 432 IPR027417 -
Seca7g03850 825 Gene3D - 182 320 IPR027417 -
Seca7g03850 825 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 11 133 IPR008808 -
Seca7g03850 825 Pfam NB-ARC domain 192 413 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03850 Seca-Chr7 114981557 114985014 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03850 202 755 WRKY Transcription Factor Family AT5G45050 23.333 5.55e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03850 - - aprc:113874975 1348.95