Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03844 ATGCCTCTTTCTCGTAAACCGTTTTCTCCTTCCTCTCCTTCGCCGTCGAATGGAACCAACCAAAACGACGGCGTTGCCAAAACCGGCAATTCTGTTCCGGCGCGGCGACTCACCAGACAGAGAAAGCTCCGGCACCTCAGTGACCAAGACATTGGCTCGTTGTATTCCACTGATTCGTCACCATCGTCTTCTTCTCCTTCGTTTCAAGGTTCACCTGAGCCATCTCTCAAGTCTCGCTCACTCGGCTGTTCCGACCACCGCTCCTCCTCTGCCTCGCCGCAACCGCTGCCGCTTCCCGAGTCGCCGTTGACCCGACGACCCGGGTCAACCCGCCCCGATCTCTTTGCACACCGGAGCTTTCCTCTTCCGAGGAAGACAGAAGATCATGATGGAATGGTAAATACAAAACCTTCACACAATTTGGGAAAATCCTCTTTAGATTCTAATCTTGCAAATTCTAAATATAATCTGAGAGTGCATATTCCAGCTGCAAGGTTCTTGACAGTTGTTAATGTAGGCAATAGTTCATATAAAGACCCTAGAATTGTCTCTCATGATAATGATGACTCTGAAAGTATTCCCAACTTGAGCTTGGGTGTTGCTGCCAAGAGTGCCCCAACAAGTGCAGTCACCACTCCTGTTACTAGTCCACGTAGATCAAGCAATGTGGATTTCCTTGATCCTACTGCCAATTTTCCTTTAGAAGTTAATGACAATGTGAAAATGTTACCAGCTAAAACTGTTCATAGTCCAGACCATTCTCCTCCTCATTGCCCACTGATCCTTGCTCGTTTCATTAATCCAAAAACTCAAGAGGGATCTCAGCACCCTAAATTTTTGTCCAGTATGTGGCCTGAAAATAACCATGTTGATGCACATCCATTACCCCTTCCTCTTAGAGCTTCACCACCAGCACAATTACCTATGCTGCATCAACCAAGTACCATGCCTCATGCAATGGAAAATCTTCCTTCAGTGAAAGGTCGATGGCAGAAAGGAAAACTTATTGGACGTGGTACCTTTGGGAGTGTTTTTCATGCAACCAACCTGTATGCAATTCATTCATTTGTTCTCCTGGCTACTCTTTCAAAATTATCTGCTAATGCTATGAAGTATGCTTTCTCTATGAATACTCATGTGCATTACTGTTTATATAACAGTGAGACTGGAGCCTCATGTGCAATGAAGGAGGTGGATCTAATTCCAGATGATCCTACATCTGTTGAGTGCATGAAGCAACTAGAGCAGGAAATCAGAATTCTCCGTCAACTACGCCATCCCAATATTGTGCAGTACTATGGAAGTGAAATAGTTGGCAATCATTTGTACATATATATGGAGTATGTCCATCCTGGATCAATTAACAAATTTATTCATGAACATTGTGAAGCTATGACAGAATCTGTGGTTCGCAATTTTACAAGGCATATTCTCTCTGGATTGGCTTACTTACACAGTACCAAAACTATCCACAGAGATATCAAAGGCGCAAACTTGCTGGTCAATGAATCAGGCATTGTCAAGCTTGCTGATTTTGGGATGGCAAAAATTTTGACAGGGAATTCATATGAACTTTCTTTGAAGGGTAGTCCTTACTGGATGGCTCCAGAGGTCATGAAAGCCACCACAAAAAACGAATCCAATCCTGACCTTGTCATGGCCATTGATATATGGAGCTTAGGGTGCACCATCATTGAAATGCTGACAGGCAAACCTCCTTGGGGTGAATTTGAAGGGCCTTCAGCCATGTTCAAGGTACTGCAACAGTCCCCGCCTATACCGGAAACTTTATCTTCAGTGGGAAAGGATTTCCTCCAGCAATGTTTTCAAAGGGACCCTGCAGATCGACCATCTGCAGAGATGCTTCTTAAACATGCCTTCGTGCAGAATTTGCATGATCAAGATCTTCTAGTTCATCCTCCTATTGGAGACCCAGGATCAAGAGATAATTCTCCTAGTCCCAGTGACACTACCAAAAATAGACGTCACTCAATGCCATCCTCCATGAGTGCACGGACTTTTAACAAAATTCAGAAACTAACCAGTGACACTTCCCAACAAAATACTACTGAGGAATCTAATCACATCATACCTTATCGTCACTCTCAAGTTCCAGAAGTTAACATTCTTCAGTCTTCCTTCAAACCCGATACCCTCAATTACATGTCTGTTGCAAACAACAGCAACATACCACTCACTGTCATGAGAATGATCACGCACCTTTGA 2226 0.4398 MPLSRKPFSPSSPSPSNGTNQNDGVAKTGNSVPARRLTRQRKLRHLSDQDIGSLYSTDSSPSSSSPSFQGSPEPSLKSRSLGCSDHRSSSASPQPLPLPESPLTRRPGSTRPDLFAHRSFPLPRKTEDHDGMVNTKPSHNLGKSSLDSNLANSKYNLRVHIPAARFLTVVNVGNSSYKDPRIVSHDNDDSESIPNLSLGVAAKSAPTSAVTTPVTSPRRSSNVDFLDPTANFPLEVNDNVKMLPAKTVHSPDHSPPHCPLILARFINPKTQEGSQHPKFLSSMWPENNHVDAHPLPLPLRASPPAQLPMLHQPSTMPHAMENLPSVKGRWQKGKLIGRGTFGSVFHATNLYAIHSFVLLATLSKLSANAMKYAFSMNTHVHYCLYNSETGASCAMKEVDLIPDDPTSVECMKQLEQEIRILRQLRHPNIVQYYGSEIVGNHLYIYMEYVHPGSINKFIHEHCEAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVNESGIVKLADFGMAKILTGNSYELSLKGSPYWMAPEVMKATTKNESNPDLVMAIDIWSLGCTIIEMLTGKPPWGEFEGPSAMFKVLQQSPPIPETLSSVGKDFLQQCFQRDPADRPSAEMLLKHAFVQNLHDQDLLVHPPIGDPGSRDNSPSPSDTTKNRRHSMPSSMSARTFNKIQKLTSDTSQQNTTEESNHIIPYRHSQVPEVNILQSSFKPDTLNYMSVANNSNIPLTVMRMITHL. 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03844 741 MobiDBLite consensus disorder prediction 1 133 - -
Seca7g03844 741 Gene3D Transferase(Phosphotransferase) domain 1 452 706 - -
Seca7g03844 741 MobiDBLite consensus disorder prediction 636 674 - -
Seca7g03844 741 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 45 638 - -
Seca7g03844 741 MobiDBLite consensus disorder prediction 50 94 - -
Seca7g03844 741 Pfam Protein kinase domain 384 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03844 741 SUPERFAMILY Protein kinase-like (PK-like) 328 707 IPR011009 -
Seca7g03844 741 MobiDBLite consensus disorder prediction 10 28 - -
Seca7g03844 741 Gene3D Phosphorylase Kinase; domain 1 311 448 - -
Seca7g03844 741 MobiDBLite consensus disorder prediction 648 674 - -
Seca7g03844 741 SMART serkin_6 330 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03844 741 FunFam Predicted protein 371 641 - -
Seca7g03844 741 ProSiteProfiles Protein kinase domain profile. 330 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03844 741 MobiDBLite consensus disorder prediction 118 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03844 Seca-Chr7 114829120 114835351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03844 290 630 MAP Kinase Kinase Kinase AT5G66850 59.531 1.20e-141 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Seca7g03844 Pkinase 1.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03844 - - gmx:100819530 866.685