Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03837 ATGAGGGTTATTAAAGATGTGGCTTCTGCGGTCTTATACTTGCATGAAGGGTGGGAAGCTAAAGTAGTGCATAGGGACATTAAGGCTAGCAATGTGTTGTTGGATAAGGATATGAATGGAAGGCTTGGAGATTTTGGGTTAGCCAAAATGCACAGCCATGGTCAAATTTCTAGCACCTCAAAATTGGTTGGAACAGTTGGGTACATGGCTCCTGAATATGCATTTGATGGACATTTTTCAGTTAAGTCTGATGTCTTTAGCTTTGGTGTGGTGGTACTAGAGATTATTAGTGGAAAAAGGAACTAG 306 0.4085 MRVIKDVASAVLYLHEGWEAKVVHRDIKASNVLLDKDMNGRLGDFGLAKMHSHGQISSTSKLVGTVGYMAPEYAFDGHFSVKSDVFSFGVVVLEIISGKRN. 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03837 101 SUPERFAMILY Protein kinase-like (PK-like) 2 100 IPR011009 -
Seca7g03837 101 Gene3D Transferase(Phosphotransferase) domain 1 1 101 - -
Seca7g03837 101 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Seca7g03837 101 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03837 101 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 101 - -
Seca7g03837 101 Pfam Protein kinase domain 3 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03837 Seca-Chr7 114616252 114617414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03837 1 100 Receptor kinase-like Gene Family AT4G04960 59.000 3.85e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca7g03837 Pkinase 2.4e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03837 - - gsj:114386544 161.384