Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03795 ATGAATGAGGCATCGATTCCAATAGCCCAAGGTGTAGAGAAATGGGTCAAAAATATTCATGAAAATATCGTGCAACATGACCAGGAGAGTGTTGTTGACTATACACCATACTTGGAAATGGAGTTTGAATCTGAGGTTGCGGCCTATGAATTTTATAATGAGTACAGTAGAAGAATTGGGTTTGGTATTCGTCGAGAATATGGAAATAAAAGCAAAAAAGATGGAATTCTAACTTCAAGAAGGGTTTTTATTCGTTTGATTGAAGTTGAAAATTTTGCTGTTGTTGCTGTTGGTGTTTTGCTGCTGTCGTTAAGGAATTCTTACCAAAGATTGCATTGTGTCTCAGATTGGTTTCGTTTGGCTTCAGTAGTGATGGATAAATCTGAAACTGCTTCAATGATTAAAGAGGAAGATTATATAGATCCTATATTTGATTCTGGGTGTGATGGTAGTGTTAGTGTTAGTGTGGATGGTAGTGAATTGTGTGAGAAGAATGAAAAAGTTGACATTGATGTTGGAGAAGGTCAGTTAAGAAAGATTTTTGATCTAACTGCTGATGAATTTCGCTGCCTTGAGTTTGGTAGTGAAGAAGAAGCCTATCATTATTATAAGTTATATGCAAAATTTCATGGATTTGTGGTTAGAAAAGATGATGTAACAAAGGATATTAGGGGTAATATTATTATGCGTCAGTTTGTTTGCAATAGGGAGGGTTTAAGGAAGAAGAAGCACCTTATGAGAGTGGATAGGAAGAGAGAGCATAGGCCACTTACCCGTACAAACTGCCAAGCTAAGCTTCGTATACACTACGATTACAAGATTTTTAAATGGATAGTTGTGTCCTTTGAGGAATGTCATAACCATGAACTTACCCCACCAAGATATGTTCACTTACATTCTGCTTATCGTAGTTTGACAGAAGGGGATAAGGCCCAGGTTGACATTTTGCATTCTTATGGTGTTAGAAGTTGTCACATCATGGGGTATCTAGTAGCTCAGAAAGGGGGATATGGTCGAGTTGGTTTTACAAAGAAGGACATGTACAATTATCTTGACCGTAAAAATCAAGCAAAGATTAAGAAAGGGGATAAAAGTGCGAAAAGATCGAATAATGATGAGTTTCAACCTTCTGAAAGTAGTGACAAGAGTGCAGAAAGCGAAAGTGAGAAAGATCCAAGGGCCTCCGTTGAAACTAATGGATGTGAGACCAATCCTCAATCTAACTGCAGATTGAAAAATAAAGGTAAAGCAAAAGAGAACTCTGGTGCTAAAAAGAAGTCCAAAAAGGTCAAAGAAGAAGAGAAACAAAATGAGCATAAGGAGAAAATCAGTCCAGGTGGTTGTTCAAGTGTTGCTAGGCCTGGAATTTCTCAAGGGGTGCCTTTTTACCACCCATTGCAAATTACTCCAGTTTACAGTCAGAATACCCATATTCCGATTTTCCACCCAAATTTACAAGTGCCAAACTTTGCTCAAGTTCCTCAGTATTTTTCTGGAGTATGGAATACTGCAAGTAATGCTACCCCTTGGCATAATTTGCTGCAGCAAGTTATGAATGGTGGGGGTAATCTCAATGGAAAAGATGCCCCTCGTTAA 1596 0.381 MNEASIPIAQGVEKWVKNIHENIVQHDQESVVDYTPYLEMEFESEVAAYEFYNEYSRRIGFGIRREYGNKSKKDGILTSRRVFIRLIEVENFAVVAVGVLLLSLRNSYQRLHCVSDWFRLASVVMDKSETASMIKEEDYIDPIFDSGCDGSVSVSVDGSELCEKNEKVDIDVGEGQLRKIFDLTADEFRCLEFGSEEEAYHYYKLYAKFHGFVVRKDDVTKDIRGNIIMRQFVCNREGLRKKKHLMRVDRKREHRPLTRTNCQAKLRIHYDYKIFKWIVVSFEECHNHELTPPRYVHLHSAYRSLTEGDKAQVDILHSYGVRSCHIMGYLVAQKGGYGRVGFTKKDMYNYLDRKNQAKIKKGDKSAKRSNNDEFQPSESSDKSAESESEKDPRASVETNGCETNPQSNCRLKNKGKAKENSGAKKKSKKVKEEEKQNEHKEKISPGGCSSVARPGISQGVPFYHPLQITPVYSQNTHIPIFHPNLQVPNFAQVPQYFSGVWNTASNATPWHNLLQQVMNGGGNLNGKDAPR. 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03795 531 MobiDBLite consensus disorder prediction 358 396 - -
Seca7g03795 531 MobiDBLite consensus disorder prediction 358 451 - -
Seca7g03795 531 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 81 - -
Seca7g03795 531 MobiDBLite consensus disorder prediction 397 411 - -
Seca7g03795 531 Pfam FAR1 DNA-binding domain 202 291 IPR004330 -
Seca7g03795 531 Coils Coil 423 443 - -
Seca7g03795 531 MobiDBLite consensus disorder prediction 412 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03795 Seca-Chr7 113809906 113818775 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g03795 FAR1 4.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03795 - - ccaj:109792835 275.018