Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03782 ATGGTTGATGTTGGAGGTGATGTGTGTAAAAGGATAACAGAATTGACTGTTGATGATATACTAGGATTAGAGTTTGGATCTCAAAAGGAAGCATATGAATTTTACAATCAATATGCTAAAGCTCACGGATTAATGAAAAGGAAAGATGAGATAAAAAGGGATGTTAGGGGTAACATTGTAATGCGGCAGTTTGTATGCAACAGAGAAGGATTGAGGAACAAAAGGCCTTTGATGAGGTTAGATCGAAAAAGGGATCATAGAGCAATCACTCGCACTAATTGTGAAGCTAAATTACGAATACGCTTCAATTGA 312 0.3654 MVDVGGDVCKRITELTVDDILGLEFGSQKEAYEFYNQYAKAHGLMKRKDEIKRDVRGNIVMRQFVCNREGLRNKRPLMRLDRKRDHRAITRTNCEAKLRIRFN. 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03782 103 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 101 - -
Seca7g03782 103 Pfam FAR1 DNA-binding domain 33 101 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03782 Seca-Chr7 113683201 113683512 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g03782 FAR1 4.2e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03782 - - ccaj:109792835 139.043