Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03746 ATGCAGAATCAATTTAGGCAGTCAGGTGTTAAGCAACCACCTGTGCAAAAAAAAGAAGATTCTTCTCAAGGGGTGCCCTTTTCATTTGTTGGCGAGCATCAGGGCAATGTCTCTGACAATCCTGTTGATGCATCGCCAATATACAACATCAACATGAGCCATCAGACCCCCATGGCTTACATGACAAGAGCCAAAACTCTACTAGGAGTAAAACCAGCTCCTGTAATAGCTTCATTCTCATCTAGGGGACCTAACTCAATCCAACCAATAATCCTCAAGCCTGATATCACTGCACCAGGTGTGGACATTCTTTTTGCATTCACAGAAGCCATAAGTCCAACTGGTCTTCCATCAGATAATCGCCGGATTCCATATAATATTGGGTCAGGAACTTCTGCATCTTGCCCTCATGTTTCTGGAATTGTTGGCCTTCTCAAAACACTCTATCCCAATTGGAGTCCTGCAGCCTTGAGATCTGCTATAATGACAACTGGTATATATGCACTTCACAACTCTTTTAGACATATCATCACATAG 537 0.4302 MQNQFRQSGVKQPPVQKKEDSSQGVPFSFVGEHQGNVSDNPVDASPIYNINMSHQTPMAYMTRAKTLLGVKPAPVIASFSSRGPNSIQPIILKPDITAPGVDILFAFTEAISPTGLPSDNRRIPYNIGSGTSASCPHVSGIVGLLKTLYPNWSPAALRSAIMTTGIYALHNSFRHIIT. 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03746 178 SUPERFAMILY Subtilisin-like 72 167 IPR036852 GO:0004252|GO:0006508
Seca7g03746 178 Gene3D - 41 68 - -
Seca7g03746 178 MobiDBLite consensus disorder prediction 1 42 - -
Seca7g03746 178 ProSiteProfiles Serine proteases, subtilase domain profile. 1 178 - -
Seca7g03746 178 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 169 IPR045051 -
Seca7g03746 178 Pfam Subtilase family 72 165 IPR000209 GO:0006508|GO:0008236
Seca7g03746 178 ProSitePatterns Serine proteases, subtilase family, serine active site. 130 140 IPR023828 -
Seca7g03746 178 Gene3D Peptidase S8/S53 domain 69 165 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03746 Seca-Chr7 112740177 112740921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03746 43 164 Subtilisin-like Serine Gene Family AT5G59810 63.115 6.44e-46 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03746 - - bhj:120090550 176.407