Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03736 ATGGCTGAAGAAGAACAACAACAACAAACTCAGCACGGTGGTTTCGCTTCTCTCCCACCCGGTTGCAGGTTCTTCCCCTCCGAGGAGCTTCTCCTCGGATACTATCTATTTAACAAGAACACTAACGAAGCAGGGAATTTCAATGGTGCTAATTTAATCACGGAACTTGACCTCTACAATTATGATCCATTTGATTTGCCCGACGCTGCGGGATTTTCGTACGGTTACCGAGGGAGGAAGAGGCATTGGTACTGTTATACGGTTAGGGCTGGGAAGGGAAAAAGAGTGGCTGGGGGCGGGTTCTGGCTCCGGAAGGGAAGGGTTCGGGATGTTCTCGGTGGCGCTAGGAACTTCGTTATGGGTACCAGAACCCGCTTCGTTTTCTATATTGGAAATTCCCTAAAGAATGCTACCAGGACTCCTTGGATTTTGGACGAGTATGCCTTGGTTGACCATCATCTGGCTTCTTTTGTTCTTTGCCGTGTATATTTAAAGCCTCATCAAAAGAATTCTCCATCGGAGATTGGTCTGAGTTCTTTGGCAGAAGAGAGTGTCACTGCAATGCGCCACATTGGTACTCAGCTTGATGGACGTGTCGGGTCTGATGGTGTTGAAGCTAAAGCTTGTGGTGATAATTCTGTTGACAGGAAGAATGAGGTCTCTGAGCATCCACTTAGATGTGGTGATAATCCAGCTGTGACTGCACCATGTTCTGTGGATCCTCAGGGCAGTAAGCAGGAAAGGCTTTCTGGACTTCCCAACGGTGGTGCATTATTCATTGAAGCTATAGCATCTCAGCGAGATTTACTTTACATTCAAGAGCAGGATTTCATAGAATTGAATGATCTGGCATGA 855 0.469 MAEEEQQQQTQHGGFASLPPGCRFFPSEELLLGYYLFNKNTNEAGNFNGANLITELDLYNYDPFDLPDAAGFSYGYRGRKRHWYCYTVRAGKGKRVAGGGFWLRKGRVRDVLGGARNFVMGTRTRFVFYIGNSLKNATRTPWILDEYALVDHHLASFVLCRVYLKPHQKNSPSEIGLSSLAEESVTAMRHIGTQLDGRVGSDGVEAKACGDNSVDRKNEVSEHPLRCGDNPAVTAPCSVDPQGSKQERLSGLPNGGALFIEAIASQRDLLYIQEQDFIELNDLA. 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03736 284 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Seca7g03736 284 Pfam No apical meristem (NAM) protein 19 149 IPR003441 GO:0003677|GO:0006355
Seca7g03736 284 ProSiteProfiles NAC domain profile. 18 165 IPR003441 GO:0003677|GO:0006355
Seca7g03736 284 SUPERFAMILY NAC domain 14 165 IPR036093 GO:0003677|GO:0006355
Seca7g03736 284 PANTHER NAC TRANSCRIPTION FACTOR 56 18 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03736 Seca-Chr7 112630666 112633283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03736 17 165 NAC Transcription Factor Family AT3G15500 36.420 5.12e-22 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Seca7g03736 NAM 2.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03736 - - gmx:100785871 328.946