Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03730 ATGAAAATTGCAGTTGGAGCTACAAAGGGTCTAGTTTTTCTACATGAAGCAAAGAAACCAGTCATCTATAGAGATTTCAAAGCTTCAAACATTTTGTTAGACTCTGATTATAATGCAGAGCTCTCTGATTTTGGCTTGGAAAAAGATGGCCCTGAAGGGGATGATGTAACATCCTAA 177 0.3729 MKIAVGATKGLVFLHEAKKPVIYRDFKASNILLDSDYNAELSDFGLEKDGPEGDDVTS. 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03730 58 ProSiteProfiles Protein kinase domain profile. 1 58 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03730 58 Pfam Protein kinase domain 3 51 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03730 58 SUPERFAMILY Protein kinase-like (PK-like) 2 54 IPR011009 -
Seca7g03730 58 PANTHER OS01G0588500 PROTEIN-RELATED 1 55 - -
Seca7g03730 58 Gene3D Transferase(Phosphotransferase) domain 1 1 58 - -
Seca7g03730 58 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03730 Seca-Chr7 112534695 112534965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03730 1 53 Receptor kinase-like Gene Family AT4G02010 61.111 7.19e-18 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca7g03730 Pkinase 1.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03730 - - gmx:100305397 104.76