Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03728 ATGGGAAGCATGAAGGTGCATCAGTTCACACGTGGATTTTGGGAGCACGAACCCTCCCTCTCACTTGGGTGCAAGCGGTTACGCCCTCTCGCCCCCAAATTTTCTAATGACACCACCGAAATTACCACTACTTCACCCCCTCCTCCTTTCGATCTCAAAAGCTTCATTCGACCCGAAAGTGGCTCCAGACCAAAACTTGCATCCCCTGACGATAATAAGAAAGATCCACCTTCACCACACAGCCAGGTGGAAACGCATCCAGGGGGGACACGGTGGAATCCGACGCAAGAGCAGATAGGGATATTGGAGATGCTGTATAGAGGTGGGATGCGAACTCCAAATGCTCAACAGATAGAGCAGATCACGGTTCAACTTGGAAAGTATGGCAAAATTGAAGGGAAGAATGTGTTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAAAAGCAGAAGCGCAATAGTCTTGGCCTTGCCCATAGTCCTCGAACTCCCACCACAGTGTCATCCACTTTTGCAAGTACTATAACAACTTTGGAGACCCCCAAAAAGGGAGAAGTAGTTGAAAGGGATGAGGAAGATAGCCCGTTCAAGAAGTGTAGGAGCTGGGCGTTTGAGTATTTGGAAGACCAAAGTTGGTCATTGTGCAAAGAAGAAGAACAAAAAACTCTGGAGCTTTTCCCATTGCACCCGGAAGGCAGATGA 705 0.4837 MGSMKVHQFTRGFWEHEPSLSLGCKRLRPLAPKFSNDTTEITTTSPPPPFDLKSFIRPESGSRPKLASPDDNKKDPPSPHSQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLAHSPRTPTTVSSTFASTITTLETPKKGEVVERDEEDSPFKKCRSWAFEYLEDQSWSLCKEEEQKTLELFPLHPEGR. 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03728 234 ProSiteProfiles 'Homeobox' domain profile. 85 150 IPR001356 GO:0003677
Seca7g03728 234 PANTHER WUSCHEL-RELATED HOMEOBOX 4 4 234 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Seca7g03728 234 FunFam WUSCHEL-related homeobox 4 89 156 - -
Seca7g03728 234 Pfam Homeodomain 90 149 IPR001356 GO:0003677
Seca7g03728 234 MobiDBLite consensus disorder prediction 31 95 - -
Seca7g03728 234 SMART HOX_1 87 154 IPR001356 GO:0003677
Seca7g03728 234 Gene3D - 90 155 - -
Seca7g03728 234 MobiDBLite consensus disorder prediction 155 170 - -
Seca7g03728 234 MobiDBLite consensus disorder prediction 35 49 - -
Seca7g03728 234 MobiDBLite consensus disorder prediction 148 170 - -
Seca7g03728 234 MobiDBLite consensus disorder prediction 64 80 - -
Seca7g03728 234 SUPERFAMILY Homeodomain-like 86 155 IPR009057 -
Seca7g03728 234 CDD homeodomain 90 151 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03728 Seca-Chr7 112528518 112529476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03728 4 177 Wox Gene Family AT1G46480 60.656 7.52e-67 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Seca7g03728 Homeodomain 1.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03728 - - aprc:113848075 375.941