Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03721 ATGGGGTTTAGTGTAAGAAAGGGGAATGAGTTGTATTATGATAGTGAGAAAAAGTTCATACACTCCAAATATTATTTTTGTTCCAAAGGAGGGTTTACAAATAATGAAGCTGAAGATGAAGTGGCTTATGAAAGAGCAAATTCAAGAACGGGTTGTAAAGCAATGGTGCGATTTAATGTGAGTAAGGAAGGAGTTTGGAAAATTACACAGTTGGTACTCAATCACAATCACGAGTTTGTGCCACCAGAGCAAAGACATTTGTTACGTTCTATGAGAAATGTATCTAGTGTCAAAGGGGGCGTGATAAAGTCCATGGTGAATGCTGCTATAAAAGTTAAAAAGATTTGGAGTTATTTAGGAGAGGAAGTTGGTGGATTCAATAAACTTGGTTTAATTGTGAAAGATATGCATAATTATGTCTACACTGAAAAGTTGAAATTGATTGAATCCGAGGATGCTCAATCATTAGTGAATCTCTTGCGGAGTAGACAAGCACAAGATCCAATGTTCTACTACAGTGTACAATTAGACCAAGAGTCACGCCTCACAAATGTGTTCTGTAGAGATGGCAAATCGAAAGTTGATTATGATTGCTTTGGGGATGTTGTGGTTTTTGATGAAACTGCAGTTTCTTTTAATTGGTTGTTTAAAGTGTTTTTGGAAAGTATGGGAAACCAACATCCAACAATTTTTGAAAATCAAGATTCAGCCATGGCCAAAGCAATCGAACGGGAAATGCCAAATACATGTCATCGATTACGCTTGTGGCATATAGCAAAAAATGCTCCTTATTTGGGTGCTCTCAATTTTGACTCTAAGTTTCAAAGCCTATTCCAAAGATGCATGACAAGTTGTAATTCAGAAGAAGAGTTTGAAAGCACTTGGCAAAATGTGATGAATGAGTACAAGCTTCATGATCTTGTTTGGTTGAGCAATATGTACAAAATTCGTCACAAGTGGAGCACTGCTCTTAGCAAGGATGTATTTTCTGCTGATATCAAGTCCTCTCAAAGGAGTGAAAGTACAAATAGTGCATTGGGTGAAATTGTAGGTAAAACAACTAGTCTTGCACAATTCTTATTGTCATTTGAGAAGATGGTAAAAAAGTGTCGGCAACTAGAAGTTGAAAAGGAATTCAAAAATAGCCAAACTTTTTTTGAAAGAGTATCTTGA 1173 0.3632 MGFSVRKGNELYYDSEKKFIHSKYYFCSKGGFTNNEAEDEVAYERANSRTGCKAMVRFNVSKEGVWKITQLVLNHNHEFVPPEQRHLLRSMRNVSSVKGGVIKSMVNAAIKVKKIWSYLGEEVGGFNKLGLIVKDMHNYVYTEKLKLIESEDAQSLVNLLRSRQAQDPMFYYSVQLDQESRLTNVFCRDGKSKVDYDCFGDVVVFDETAVSFNWLFKVFLESMGNQHPTIFENQDSAMAKAIEREMPNTCHRLRLWHIAKNAPYLGALNFDSKFQSLFQRCMTSCNSEEEFESTWQNVMNEYKLHDLVWLSNMYKIRHKWSTALSKDVFSADIKSSQRSESTNSALGEIVGKTTSLAQFLLSFEKMVKKCRQLEVEKEFKNSQTFFERVS. 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03721 390 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 384 IPR031052 GO:0006355
Seca7g03721 390 Pfam FAR1 DNA-binding domain 1 81 IPR004330 -
Seca7g03721 390 Pfam MULE transposase domain 202 261 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03721 Seca-Chr7 112440297 112441570 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g03721 MULE 1.3e-07 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03721 - - tpra:123905334 563.533