Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03709 ATGAGTAGCATCCTCGGAAAATTGTTGGTCTCAACTTTGTACATCCTCTTCCTGTCCCTTCCTCTCCACACGTCAGCACATGACATTAACAGAGATACACTAAATTTCATCAATGCCCGCAGTGGCCACAAGAACAAAGGTGGTGGAGATGGTAGCTCAAGCAAAGGCTGCAACAACAACAACCAATTGAACAAAATACCATGTAAAAAATCAAACCCCATTCAAGCAGCTGCAGCTCCATCTTTACCTGTCAAAACAGATTCCCTGGTTTTTGCTGATCAAAGACTTGAAGTAGTGTATCCAGTGATCCAAAATTTCAAGTCCATCATCACTTCAGATCCCTTAGGAGTTACCAAATCTTGGGTAGGTTCAGATATATGTAGTTATAAAGGATTCTACTGTGATAATCCTCCAGATAACAGCTCTGCTATTGCTCTGGCTTCTGTTGACTTCAATGGTTTTCAACTTGCTGCTTCTACCCTTGATGGCTTTATTGATAAGCTTCCTGATATTGCTCTTTTTCATGCAAATTCCAACAATTTTTCTGGCACAATCTCACCCCAAATTGCCAAGTTACCTTATCTCTATGAGCTTGATGTAAGCAATAATCAATTGTCTGGTCCATTTCCCATGGCTGTTCTAGGCATGGACACATTAACTTTCTTGGATATTAGGTTCAATTTCTTCTCTGGGGCAGTCCCACCTCAGATATTCATCCAGAACCTAGAAGCCCTCTTTATCAATGACAATATCTTCACTCAGGGTTTGCCTGATAATTTAGGCAACACTCATATTCTCTTACTCACCTTAGCAAACAACAAATTCAATGGTCCCATACCTAGAAGCCTTCCAAAAGCTCTGTCTACTCTCACTGAGGTTCTGTTACTGAACAACCAGCTAACAGGTTGCTTGCCTTATGAGATTGGGTATCTTCAAGAGGCTACAGTGTTTGATGCTGGAAACAACCAGCTGACAGGTCCTTTACCATTCTCTTTGAGTTGTCTTGAGAAGGTTGAGCTGCTCAATTTGGCTGGTAACTTGCTGTATGGTATGGTGCCAGAAGTGGTGTGTGCAGGGTTGGTGAATTTGGTCAACTTTTCATTATCAGATAACTATTTTACTCATGTGGGACCATTGTGTAGGATCTTAATTCAAAGAGGAGTTCTTGATGTTCGAAACAATTGTATCCCTGATCTTCCATTCCAGAGATCAGTGTTTGAGTGTGCAACTTTCTTTTCACACCCAAGGATGTGTCCCTTCATGTGGGCTCATAATTTCATCCCTTGTAAGCTTCCTTTTCAAAACACCCCAGTTTCTTCGATTCCTTAG 1329 0.4131 MSSILGKLLVSTLYILFLSLPLHTSAHDINRDTLNFINARSGHKNKGGGDGSSSKGCNNNNQLNKIPCKKSNPIQAAAAPSLPVKTDSLVFADQRLEVVYPVIQNFKSIITSDPLGVTKSWVGSDICSYKGFYCDNPPDNSSAIALASVDFNGFQLAASTLDGFIDKLPDIALFHANSNNFSGTISPQIAKLPYLYELDVSNNQLSGPFPMAVLGMDTLTFLDIRFNFFSGAVPPQIFIQNLEALFINDNIFTQGLPDNLGNTHILLLTLANNKFNGPIPRSLPKALSTLTEVLLLNNQLTGCLPYEIGYLQEATVFDAGNNQLTGPLPFSLSCLEKVELLNLAGNLLYGMVPEVVCAGLVNLVNFSLSDNYFTHVGPLCRILIQRGVLDVRNNCIPDLPFQRSVFECATFFSHPRMCPFMWAHNFIPCKLPFQNTPVSSIP. 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03709 442 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 71 430 - -
Seca7g03709 442 Gene3D Ribonuclease Inhibitor 101 405 IPR032675 -
Seca7g03709 442 SUPERFAMILY L domain-like 102 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03709 Seca-Chr7 111972949 111974277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03709 88 415 Leucine-rich Repeat extension Gene Families AT3G24480 43.598 1.93e-85 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03709 - - gmx:100789584 693.73