Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03706 ATGGCTGTGGAGCTTATAACGGGATATCGTGGTGATAGCTTTGCAACAAGAAATAGTGTGAGGGATGACAATGCCATTGCCGTACAAGAAGCAGCTTCTGCTGGTATTCATAGCGTGGAGAAGCTCATGAACATGATTTCTGAACAGAATAAGCAGAGGAGTCCGAATAATAAACAACAAGAGGGTAATGAAGATGGTTCTTCTTCTGAATTTGAAGCTGTTGCTGATGTGGCTGTGAATAGATTCAAAGAGGTTATTTCTCTCCTTGATAGACCAAGAACTGGTCACGCTCGTTTCAGAAGGGCTCCTCCAACTGTGCCACCTGTTCCTCTTCTTCAATTGCAGCAAACAGTGGATTCAAAACCCAAACTGCTTCAGCCACAACAGAGCAAAACAGAACAAGTCTCTGCTTTTGAGGTTTATTGCCCTACACCGGTTCTACGTCCTCCTCCTTTTCCGCTACCTCAGCAGCAGCAACCACCAGAGAAGAATGAAGCACTTGGTTCTATCAAATTTTCACCTTCCCCATCAGTTTCTGCTGCTAACTCATATATCTCTACGCTAACAGGGGACAGTGAAAGTTTGCAACAACGACCCTGTCGTTCTTCAGGGTTCCCAATCACTCATGTTTCTTCTTTTATGCGTAAACCACCACTGTCTTCAACTTCTATGAAAAGGAAGTGCAATTCCATGGAGTTTCCTGCTATCAAGTGTGGATCATCCTCTGCCCAGTGCCATTGCTCTAAGAAAAGGAAATTGAAGTTAAAGAGAGTGATTAGAGTGCCAGCTGTTAGTTCTAAAACTGCTGATATCCCACCTGATGAGTATTCATGGAGAAAATATGGACAGAAACCCATTAAGGGCTCTCCTCATCCAAGGGGTTATTACAAGTGCACTAGCGTGAGAGGCTGCCCAGCACGCAAACACGTGGAGCGCGCTGTGGATGATTCTAACATGCTTATTGTCACCTACGAAGGAGATCATAATCACACAAACAATTCTTCTGAGGTGGCTAATGCTGTTGTCCTTGAATCATCTTGA 1041 0.4428 MAVELITGYRGDSFATRNSVRDDNAIAVQEAASAGIHSVEKLMNMISEQNKQRSPNNKQQEGNEDGSSSEFEAVADVAVNRFKEVISLLDRPRTGHARFRRAPPTVPPVPLLQLQQTVDSKPKLLQPQQSKTEQVSAFEVYCPTPVLRPPPFPLPQQQQPPEKNEALGSIKFSPSPSVSAANSYISTLTGDSESLQQRPCRSSGFPITHVSSFMRKPPLSSTSMKRKCNSMEFPAIKCGSSSAQCHCSKKRKLKLKRVIRVPAVSSKTADIPPDEYSWRKYGQKPIKGSPHPRGYYKCTSVRGCPARKHVERAVDDSNMLIVTYEGDHNHTNNSSEVANAVVLESS. 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03706 346 Pfam WRKY DNA -binding domain 274 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g03706 346 Pfam Plant zinc cluster domain 225 270 IPR018872 -
Seca7g03706 346 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 28 336 IPR044810 GO:0003700
Seca7g03706 346 MobiDBLite consensus disorder prediction 49 69 - -
Seca7g03706 346 MobiDBLite consensus disorder prediction 49 67 - -
Seca7g03706 346 Gene3D WRKY domain 257 332 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g03706 346 SUPERFAMILY WRKY DNA-binding domain 268 331 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g03706 346 ProSiteProfiles WRKY domain profile. 267 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g03706 346 SMART WRKY_cls 272 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g03706 346 FunFam WRKY transcription factor 65 256 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03706 Seca-Chr7 111882643 111884626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03706 27 293 WRKY Transcription Factor Family AT4G24240 47.279 1.19e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g03706 WRKY 8.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03706 - - lja:Lj0g3v0162929.1 465.307