Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03686 ATGGCGTCTGCAAGCAAAGACATGGATCGGATCAAGGGTCCTTGGAGCCCTGAAGAAGACGATGCGTTACAGAGGCTGGTTCAAATACACGGGCCAAGGAACTGGTCTTTGATCAGCAAATCCATTCCTGGTCGATCTGGGAAGTCGTGCCGTCTGCGGTGGTGCAACCAGCTGTCACCGCAGGTGGAGCACCGGCCATTCACGGCGGAGGAGGACAGCGCTATCATCAGAGCGCATGCCAGGTTCGGTAACAAATGGGCTACAATAGCTCGTCTTCTTAACGGTCGTACAGATAACGCCGTTAAGAATCACTGGAATTCCACCCTCAAGAGAAAATGCTCTGCCGTCACCGTCACAGCCGATCCCGACTCATGCGATTACCAACCTCTCAAAAGATCCGCCAGTGTCGGTGCGGGCTATTTGAACCCGAGTAGCCCATCTGGATCCGATTTGAGCGATCCGGGTTTGCCCGCTATGTCCACTCCTTCAGCACATGCTAATGTTTTCAAACCCATTGCGAGGAGCGCAACGGTGATTCCCTCAACACACTTAATCGAAACTGCATCTTCAGACACCGATCCACCCACATCGCTCACCTTATCGCTTCCCGGGTTTGAATCCTCCAACAACTGGTCCAGGTCCGGGTCGGGGTCTAAGCAGCCGATCCAGGCACGATCACCATCACCTCCTCCGCCGCCGCCGCCGCCGCCGACAGTGGCGGTTCAGAGCAGCGAGGAACGAGGGAAGCAGTTGTTCAACGCGGAGTTCTTAGCGGTGATGCAAGAAATGATAAGGAAGGAAGTGAGGAAATACATGTCTGGGATTGACCAGAATGGACTGTGTATGCAGACTGAAGCCATTGGAAACGCTGTGGTGAAGCGCATGGGAATTAGCAACGTGAAGTAG 906 0.5419 MASASKDMDRIKGPWSPEEDDALQRLVQIHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTAEEDSAIIRAHARFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSAVTVTADPDSCDYQPLKRSASVGAGYLNPSSPSGSDLSDPGLPAMSTPSAHANVFKPIARSATVIPSTHLIETASSDTDPPTSLTLSLPGFESSNNWSRSGSGSKQPIQARSPSPPPPPPPPPTVAVQSSEERGKQLFNAEFLAVMQEMIRKEVRKYMSGIDQNGLCMQTEAIGNAVVKRMGISNVK. 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03686 301 Gene3D - 65 126 - -
Seca7g03686 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 113 IPR017930 -
Seca7g03686 301 FunFam Transcription factor MYB44 66 112 - -
Seca7g03686 301 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Seca7g03686 301 SMART sant 63 111 IPR001005 -
Seca7g03686 301 SMART sant 11 60 IPR001005 -
Seca7g03686 301 Pfam Myb-like DNA-binding domain 15 73 - -
Seca7g03686 301 PANTHER MYB PROTEIN-RELATED 12 218 - -
Seca7g03686 301 FunFam MYB transcription factor 12 63 - -
Seca7g03686 301 CDD SANT 14 56 IPR001005 -
Seca7g03686 301 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Seca7g03686 301 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Seca7g03686 301 MobiDBLite consensus disorder prediction 137 159 - -
Seca7g03686 301 MobiDBLite consensus disorder prediction 224 240 - -
Seca7g03686 301 MobiDBLite consensus disorder prediction 186 223 - -
Seca7g03686 301 Gene3D - 11 63 - -
Seca7g03686 301 MobiDBLite consensus disorder prediction 186 246 - -
Seca7g03686 301 CDD SANT 66 109 IPR001005 -
Seca7g03686 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 62 IPR017930 -
Seca7g03686 301 MobiDBLite consensus disorder prediction 138 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03686 Seca-Chr7 111262081 111262986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03686 6 277 MYB Transcription Factor Family AT4G37260 52.174 8.16e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Seca7g03686 Myb_DNA-bind_6 9.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03686 K09422 - pop:7462860 377.481