Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03683 ATGGCAGCTAACGTGAACTGCAACATGCCCCAAAACACCCCCACTCACTCTCATTGGTACTCTCTAGAAACTGGAATTTACCATAGCATACACGCTCCCTTGGACCTTCCCATTAACCCTTTTATCGACCTTGTTTCCTTCATTTTTTCTCACCGCCATAATGGGGTTTCCGCCCTCGTTGATTCCTCATCTGGGTGTTCTATTTCTTACTTACAGTTGTTGTCTTTGGTCAAATCCATTGCTTCTGGTTTCCCCAGAATGGGTGTTTCACAAGGTGACGTGGTTTTGCTTTTACTTACAAATTCCATTTACTATCACATTGTTTTCTTGGGCGTTCTGTGTCTAGGTGATGTTGTTACACCATTGAATCCTCTCAGTATGTAG 384 0.4323 MAANVNCNMPQNTPTHSHWYSLETGIYHSIHAPLDLPINPFIDLVSFIFSHRHNGVSALVDSSSGCSISYLQLLSLVKSIASGFPRMGVSQGDVVLLLLTNSIYYHIVFLGVLCLGDVVTPLNPLSM. 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03683 127 SUPERFAMILY Acetyl-CoA synthetase-like 50 125 - -
Seca7g03683 127 Gene3D - 23 127 IPR042099 -
Seca7g03683 127 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 126 - -
Seca7g03683 127 Pfam AMP-binding enzyme 52 125 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03683 Seca-Chr7 111130804 111131187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03683 10 126 Monolignol Biosynthesis Gene Families AT4G19010 45.455 6.39e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03683 K01904 - gmx:100804808 188.348