Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03665 ATGAGCTGCAACGGTTGCCGAGTGCTCCGAAGAGGGTGCAGTGAGACATGCGCTTTGAGGTCATGCCTGCAGTGGATCGAGTCCCCTGAATCACAAAGAAACGCCACTCTCTTCCTCGCTAAGTTCTTCGGTCGTAGCGACCTAATTTCCTTCATATCCTCTGTCCCCGAAACCAAAAGAACTGGTACAATACAATCAACTATCTTGTTAGCCGCTGTGGAGACGGTGCTCGCCGGTGGCGTTCTTCGCCCGTTGCCGGAGACAATATTCGTCGGAGATTCCAAAGATGCATGCTCTCAGTTACGGCCGTTGGCGCCGTTCTCGCGTGATGTGGGAGAGATGAATTGGAAGTCAAGGTTGGAGTTGGATCCTGTTCAGTCTTACGTCAACAACACAAGCGCCCGTGCATTGAAGAGGCCACCGGAATTGGAAATGACGAGTTGCAGTAACCATAAAAAGCAGAATTTGAATCTTTTCCTGTAA 483 0.5052 MSCNGCRVLRRGCSETCALRSCLQWIESPESQRNATLFLAKFFGRSDLISFISSVPETKRTGTIQSTILLAAVETVLAGGVLRPLPETIFVGDSKDACSQLRPLAPFSRDVGEMNWKSRLELDPVQSYVNNTSARALKRPPELEMTSCSNHKKQNLNLFL. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03665 160 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 66 - -
Seca7g03665 160 ProSiteProfiles LOB domain profile. 1 108 IPR004883 -
Seca7g03665 160 Pfam Lateral organ boundaries (LOB) domain 2 73 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03665 Seca-Chr7 110513889 110514535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03665 1 89 AS2 family AT4G37540 53.509 7.02e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Seca7g03665 LOB 2.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03665 - - gmx:100781993 164.466