Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03660 ATGAGAACGCAACGGCCTCTTCATCTCTTCCTATCCTTCCTCTTCCTCGCAACCGCATTCTCCACTTTCCATCCGACGGCCACCGCCGTAGACGAAGGTCCGGTCACCGGCGGCGACGAGGACACTGAATTCATCCGCACAAGTTGCAACACCACGCTGTACCCTGACGTCTGCTACACCTCCCTCTTTCGCTATGCCAATGCGGTACAACAGAACCCTGGCCAGCTAGCTCGTGTCGCCATATCCGTGAGCCTCTCGAAGGTCCACCGCACCGCCTCCTACATCTCCAACCTCACTCGCGAAACCGACTACGGCGGCAACTCGCGCGCTACTCAGGCACTCCACGACTGCTTCTCCAACCTCGGCGACGCCGTCGACGAAATCCGTGGCTCGCTCAAGCAGATGCGCCAGATAGGAGCCGCCGGAGCCGGAGCCAGCTCGTTCTTGTTCCAGATGAGCAACGTACAGACGTGGATGAGTGCGGCGCTCACCGACGAGGAGACTTGTACGGACGGATTCCAAGACGTACCGGACTGTCCGACGAAAGCGGATGTATGCGATCGGGTCACGCACGTGAAGAAGTTCACGAGCAATGCTTTGGCGCTCGTGAACAGCTACGCCAACAAGGGAATGCCTTGA 639 0.59 MRTQRPLHLFLSFLFLATAFSTFHPTATAVDEGPVTGGDEDTEFIRTSCNTTLYPDVCYTSLFRYANAVQQNPGQLARVAISVSLSKVHRTASYISNLTRETDYGGNSRATQALHDCFSNLGDAVDEIRGSLKQMRQIGAAGAGASSFLFQMSNVQTWMSAALTDEETCTDGFQDVPDCPTKADVCDRVTHVKKFTSNALALVNSYANKGMP. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03660 212 Pfam Plant invertase/pectin methylesterase inhibitor 44 202 IPR006501 GO:0004857
Seca7g03660 212 FunFam Pectin methylesterase inhibitor 1 40 206 - -
Seca7g03660 212 CDD PMEI-like_3 47 208 - -
Seca7g03660 212 SMART PMEI_2 40 202 IPR006501 GO:0004857
Seca7g03660 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 202 - -
Seca7g03660 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 206 IPR035513 -
Seca7g03660 212 NCBIfam pectinesterase inhibitor domain 13 206 IPR006501 GO:0004857
Seca7g03660 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 206 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03660 Seca-Chr7 110251527 110252165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03660 45 205 Carbohydrate Esterase AT3G14310 22.840 6.10e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03660 - - gmx:100812251 334.339