LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca7g03658	ATGTATGCTAGAACAAAAGGATTTGCTGCCCGTCAAGGCAATAAGGTGAAAAACAAGGATAAAGTTGTAACATGGCAAACTTTTTTATGCAACAGACAAGGAGAGAGACAGAATAGAGGGTTGACTGATGAGAATCGCAAGCGAAAGCCAAGGCCAATTGCGAGGTGCTGGTGTCAGGCAATGTTTCATGTACATGTTGATATGTACAGTGGTCGTTGGTATATTACTAAATTTGAAGATGATCACAATCATGAGATGTATGATGATTTATATTGTGGAATGATACCAGCATATAGGGGAATGAATGAGGCTCAAGTTATGCAAATGAATAATATGATGAAGGTAGGAATACGTCCACCCCTCATATATAGTTCCTTTGCTAGGAAACCTGGGGGATTTGAGAAGATTGGTTTCCAAAAGAAGGATTTGTATAACAAGATAGCAAGACAAAGGCATCGTAGAGGTGAGAACGGTAAGTCTTCATTAAATTACATTCGATCTCTACATGTGAAGGACCCTCTTTTGTGTTGTGAACACACTGTTGACGATGAAGGAAGATTGCAACACTTGTTTTGGTCGGATGGGTTTTGCCGAATGGACTATATGGTTTTTGGTGATGTTATGTGA	627	0.3939	MYARTKGFAARQGNKVKNKDKVVTWQTFLCNRQGERQNRGLTDENRKRKPRPIARCWCQAMFHVHVDMYSGRWYITKFEDDHNHEMYDDLYCGMIPAYRGMNEAQVMQMNNMMKVGIRPPLIYSSFARKPGGFEKIGFQKKDLYNKIARQRHRRGENGKSSLNYIRSLHVKDPLLCCEHTVDDEGRLQHLFWSDGFCRMDYMVFGDVM.	209

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca7g03658	208	Pfam	FAR1 DNA-binding domain	2	86	IPR004330	-
	Seca7g03658	208	PANTHER	OS01G0519700 PROTEIN	2	206	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca7g03658	Seca-Chr7	110225248	110225874	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Seca7g03658		FAR1	4.6e-18	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca7g03658	-		-	mtr:112420123	238.81