Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03652 ATGCCATGTGAACATTTATATCCACTCATGGACCATCTTACACCAAACTATAAGACAACAAAAGTGATAAGAATGTTGCTCGAAATGGACCAGTCAAAGGTAATCCATCTGATTGAATTTCCTGAGGACTTAAAGATAAAGGTGTCTGAGGAAATGCAAGTCCTTCGTTAA 171 0.3743 MPCEHLYPLMDHLTPNYKTTKVIRMLLEMDQSKVIHLIEFPEDLKIKVSEEMQVLR. 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03652 56 Gene3D - 1 56 - -
Seca7g03652 56 SMART poly_2 4 56 IPR002004 GO:0003723
Seca7g03652 56 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 1 56 IPR002004 GO:0003723
Seca7g03652 56 Pfam Poly-adenylate binding protein, unique domain 4 55 IPR002004 GO:0003723
Seca7g03652 56 SUPERFAMILY PABC (PABP) domain 4 56 IPR036053 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03652 Seca-Chr7 110066840 110067010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03652 1 56 Eukaryotic Initiation Factors Gene Family AT1G49760 57.143 3.98e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03652 K13126 - gmx:100783163 75.0997