Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03642 ATGGCCAATTTGCAAACCTTCCCCACCGAGATGGTTGTTCCTGATCAATTCCCAGCAGGTCTCAGCGTTCTTGCAGTTGATAATGATAACACAGTCCTTAAATTCATTGAGGAAATATGTATTCGATGCCATTATCGCGTTACCACATGCTCTGAGGCTCGAGCTGCCTTGAATCTTTTGAGTGAAAGAAAGGGTTCTTTTGATATCATACTAATTGATGATCATACACCAGACATGGATGCCTATGGATTTCTTCACCATGTTTCCCAAAGATTGAATCTTTCTGTTATTATGATGTCTATTGATGCTGCGAAAAGTGCTGTCATGAAGGCTATTAGACATGGGGCTTGTGATTTTTGGACTAAGCCTTTGTGCGAGCAACAGTTCAAGAATATATGGCAGCATTATGTGAGGAAAGCCTTGAGAGAGAATAAACAAGAAAAAAGATTTAGCAACTTGGAAGATATTCCAGATGATGATCAGAGAAAACAGGGGAAAGATTATTCTGAATTTCCTTCTTCTTCTGTTATTGATGCAGCAAAAGGGGTCCTTAATGCCCCAAAAGAGAGCACTTCAAATGAAACTGATGCTGATGAATCAGAGAATCTTTATCAACCTCCAAAAAAGAAGCCTCGTGTAGTATGGACAGAAGAATTGCATCAACATTTTGTTTGA 675 0.3926 MANLQTFPTEMVVPDQFPAGLSVLAVDNDNTVLKFIEEICIRCHYRVTTCSEARAALNLLSERKGSFDIILIDDHTPDMDAYGFLHHVSQRLNLSVIMMSIDAAKSAVMKAIRHGACDFWTKPLCEQQFKNIWQHYVRKALRENKQEKRFSNLEDIPDDDQRKQGKDYSEFPSSSVIDAAKGVLNAPKESTSNETDADESENLYQPPKKKPRVVWTEELHQHFV. 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03642 224 Gene3D - 21 155 - -
Seca7g03642 224 SUPERFAMILY CheY-like 20 153 IPR011006 -
Seca7g03642 224 SMART REC_2 21 133 IPR001789 GO:0000160
Seca7g03642 224 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 224 IPR045279 GO:0009736
Seca7g03642 224 CDD REC_typeB_ARR-like 23 135 - -
Seca7g03642 224 ProSiteProfiles Response regulatory domain profile. 22 137 IPR001789 GO:0000160
Seca7g03642 224 MobiDBLite consensus disorder prediction 150 167 - -
Seca7g03642 224 Pfam Response regulator receiver domain 23 130 IPR001789 GO:0000160
Seca7g03642 224 MobiDBLite consensus disorder prediction 150 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03642 Seca-Chr7 109884166 109885165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03642 15 224 Response Regulator Gene Family AT4G16110 42.180 5.18e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca7g03642 Response_reg 2.4e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03642 - K14491 pcin:129311779 228.024