Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03641 ATGAGAACTTCTTTCTCCCTTACTTATTCAGAGGCTATGCCAAAGAGAATTCTTGAAGTGATGAATGTTCCTGGTTTGACAAGAGAGAATGTTGGTAGTCATTTGCAGAAATATAGACTTAGCATAAAGAAAGCATTTGAAGAGGCAAGACAACGGAATCAATTGCCAAATGTCTTCCCTATGAGTATAAAATCGAATGGGGAGGCATATGGAGGATTTAACATTGAAGCACTGACTGGCCTTCAAACTGGGTTCAGAGATAACTTAATTCCAAGACAAGACCAAAGTGCCCAATTGATATCATCTTTGCAGTGGCCCCCTAACTCTTCCCAAGCCATGCTGCCATATAGCCATCCTTCCCAAGCCATGCTGCCATATAGCCATCCTCTTATAAAATATCCTTCTAATAATAACATTACCAAGGATTTTCCGCCATCCAACATAACTGCATCATCAATATATGGACCATTGTCTCCATATAATACAATTGATTCAGGTGGAGAATTTAAGATATAG 516 0.3915 MRTSFSLTYSEAMPKRILEVMNVPGLTRENVGSHLQKYRLSIKKAFEEARQRNQLPNVFPMSIKSNGEAYGGFNIEALTGLQTGFRDNLIPRQDQSAQLISSLQWPPNSSQAMLPYSHPSQAMLPYSHPLIKYPSNNNITKDFPPSNITASSIYGPLSPYNTIDSGGEFKI. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03641 171 Gene3D - 1 63 - -
Seca7g03641 171 NCBIfam myb-like DNA-binding domain, SHAQKYF class 10 40 IPR006447 GO:0003677
Seca7g03641 171 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 9 118 IPR044841 GO:0003700|GO:0006355
Seca7g03641 171 SUPERFAMILY Homeodomain-like 9 44 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03641 Seca-Chr7 109882755 109884079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03641 7 101 Response Regulator Gene Family AT5G58080 43.158 1.19e-13 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca7g03641 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03641 - K14491 pcin:129311779 103.219