Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03629 ATGTTGTGTGCTTGCTCCGGGGAGCAATTCAAATTTGAAGAGGCACCACAGTCACCGGAGTCCTTGGCAACAAGGGATTTCTCTGCCAGTGGAATATCTTCAAGGACTGGGGATTGGGAACCGAAATTTGATGAAGCCCAAGTAGAAGATGTTGAATCTACTCTAAAAGAAGCTCTCTCATTAAACTATGAGGAAGCTCGGGCTTTGCTGGGGAGGCTTGAATATCAAAGAGGGAATTTTGATGCTGCCCTTCAAGTGTTTCAGGGGATAGAAATCAGGGCTTTGACCCCAAGGATGATCAGGGCTATAGCTGAAAGAACCAAGCAAAGAAAACCACGTTCCAAGGCAGATAATGTGCTTCCTAATTTGATGTCAATGCATTCAATAAGCCTCCTTCTTGAGGCAATTTTGCTTAAAGCCAAATCCTTAGAGGACCTTGGGAGATACACTGAGGCTGCAAAGGAGTGCAGAATAATTGTGGATACAGTTGAATCTGCTCTTCCTAATGGAATGGTTGAGGGTATTGGTGAAGATTGTAAGTTGCAAGAAATGTTCCACAAAGCATTGGAGTTGCTTCCAAATCTATGGATCAAGGCAGGCTTTCTAGATGAAGCTGTCACATCTTATCGGCGGGCCCTGGTCAAGCCCTGGAATTTGGAGCCATGGAGGTTGGCCTGTCTACAAAAAGATTTAGCTAGCACATTGCTCTATGGTGGTGTTGAAGTAAACCTACCCTCTGAGTTGCTAGGGAAGGGTCCAACAACACCTATGAGTAACATTGAAGAAGCAATAATTTTGCTACTAATACTCTTAGGAAAGATGGCACTTCAGGAAATAGATTGGGATGCAGAAATAATGCATCATCTTACATTTTCACTCTCAATTTCTGGGATGTTTGAATCATTGGCAGATCGTGTAGAACAGATACTTCCTGGTATCTATGATCGAGCTGAGAGATGGTACTTTCTTGCTCTTTGTTACAGTGCAGCAGGACAGAATGAAGCAGCCTTGAACCTTTTGAGGAAGGCTTGTGGTAGTTCAGAAGCAAAGCATAAACCCCATTTTTCTTCATTTTTATTTGGTGCAAAGTTGTGTTCCCAATATCCTAACCATGCTCATGAAGGCATTAAATTTTCAAGGAAAGTTATTGATCTAGCCAAGCATCAAAATGAGCATTTTTTGTGTCAAGGCAAGAAATTTCTTGGTATTTGCTATGGGGCTGCGGCTAGAAAATCAGTACTGGATTCTGAAAGAATTACATTTCAAAGAGAGTCTTTGAACTTTCTAAATGAAGCTGCTCTAACTGGAAATGATGACCCAGAAGTGATATTCAGCCTTGGATTGGAAAATGCACTTCAAAGGAATCTAAATGCAGCTTATTACAACATGATGATGTACTCAGATATGATGGTTGGCAGCTCTAGAAGAGGTTGGCAGCTGTTAGCACTCATAGTATCTGCACAGCAGAGGTTTAAGGATGCAGAAACTATAGTTGATTTTGCTTTAGATGAGGCTGGGAGGATAGATCAATTAGAACTACTAAGACTAAAAGCTGTACTTCAAATTGTACAGCAGCAACCCAAGCAAGCAATAGAGACCTACAGAATCTTGCTATCAGTAATAGAAGCAAAAAAGGAGTTTTGGATTCAAGCTAAGAACTTTGATCAAGCAAAAATATCCAGGGATGAGGCAATAACAGAAAGGAAGTTGGAAATTGAAGCCTGGCAGGACTTAGCAACCATTTATGCAGATCTTAGTTCTTTTCTTGATGCAAAAGCTTGTGTTGACAAAGCCCAGTTGATAGAATTTTTTTCTCCCAGAAGTTGGCATATTACAGGGATGTTGTTTGAAGCTCAATCATTATACAAGGAGGCCTTTGTTTCCTTCTCAATCTCGTTATCAATAGAACCAGATTACATTCCCAGTATCATTTCAACTGCAGAATTGTTGCTTAAACTTGGTATGCAATCACTTCCAATTGCAAGAAGTTTTTTAATGAATGCTTTGCGGTTGGAACCAACAAACCATGATGCATGGTTCAACCTTGGATTGGTTTCAAAAATGGAAGGTTCATTACAACAAGCAGCAGATTGTTTTCAAGCTGCATATGAGCTGAAACTTTCAGCTCCAGTGCAAAAAATTGAGTGA 2148 0.406 MLCACSGEQFKFEEAPQSPESLATRDFSASGISSRTGDWEPKFDEAQVEDVESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIEIRALTPRMIRAIAERTKQRKPRSKADNVLPNLMSMHSISLLLEAILLKAKSLEDLGRYTEAAKECRIIVDTVESALPNGMVEGIGEDCKLQEMFHKALELLPNLWIKAGFLDEAVTSYRRALVKPWNLEPWRLACLQKDLASTLLYGGVEVNLPSELLGKGPTTPMSNIEEAIILLLILLGKMALQEIDWDAEIMHHLTFSLSISGMFESLADRVEQILPGIYDRAERWYFLALCYSAAGQNEAALNLLRKACGSSEAKHKPHFSSFLFGAKLCSQYPNHAHEGIKFSRKVIDLAKHQNEHFLCQGKKFLGICYGAAARKSVLDSERITFQRESLNFLNEAALTGNDDPEVIFSLGLENALQRNLNAAYYNMMMYSDMMVGSSRRGWQLLALIVSAQQRFKDAETIVDFALDEAGRIDQLELLRLKAVLQIVQQQPKQAIETYRILLSVIEAKKEFWIQAKNFDQAKISRDEAITERKLEIEAWQDLATIYADLSSFLDAKACVDKAQLIEFFSPRSWHITGMLFEAQSLYKEAFVSFSISLSIEPDYIPSIISTAELLLKLGMQSLPIARSFLMNALRLEPTNHDAWFNLGLVSKMEGSLQQAADCFQAAYELKLSAPVQKIE. 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03629 715 Gene3D Tetratricopeptide repeat domain 257 542 IPR011990 GO:0005515
Seca7g03629 715 SUPERFAMILY TPR-like 549 706 IPR011990 GO:0005515
Seca7g03629 715 Gene3D Tetratricopeptide repeat domain 546 710 IPR011990 GO:0005515
Seca7g03629 715 ProSiteProfiles TPR repeat profile. 606 639 IPR019734 GO:0005515
Seca7g03629 715 ProSiteProfiles TPR repeat profile. 676 709 IPR019734 GO:0005515
Seca7g03629 715 Pfam Tetratricopeptide repeat 317 347 IPR019734 GO:0005515
Seca7g03629 715 Gene3D Tetratricopeptide repeat domain 14 232 IPR011990 GO:0005515
Seca7g03629 715 SMART tpr_5 133 166 IPR019734 GO:0005515
Seca7g03629 715 SMART tpr_5 676 709 IPR019734 GO:0005515
Seca7g03629 715 SMART tpr_5 606 639 IPR019734 GO:0005515
Seca7g03629 715 SMART tpr_5 572 605 IPR019734 GO:0005515
Seca7g03629 715 SMART tpr_5 511 544 IPR019734 GO:0005515
Seca7g03629 715 SMART tpr_5 317 350 IPR019734 GO:0005515
Seca7g03629 715 SUPERFAMILY TPR-like 302 539 IPR011990 GO:0005515
Seca7g03629 715 SUPERFAMILY TPR-like 65 461 IPR011990 GO:0005515
Seca7g03629 715 Coils Coil 56 76 - -
Seca7g03629 715 PANTHER PROTEIN NPG1 1 714 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03629 Seca-Chr7 109263976 109268880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03629 1 712 Calmodulin-binding Proteins AT1G27460 58.799 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03629 K21843 - gmx:100799086 1204.5