Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03622 ATGGCATTGGTGGTGGCTCCCGAAGATGCAGCAGCACTTGTCAACCTTGAGTCAGCATATTCTGATGTGGAAGCTCTCCTTCGAGCTTCAGAGGAAATGGAAGATAACCTTGAAACAATGGAAACAAGGTTTAATCTTAAACAAGGATCATTATCAACAGCATCAAGAAGAATCGCCCCTTTGCAGTCCTTGGCCATGTCAAGGAAAGCACTTGATACCAGAATCAACAGAGCAATTTCCCCTGCTCTTGCACTCCTAGACATGTTCAAGCTCACAGAGTCTCTCCAGAACAACCTCACTGATCTCTCATCGAAACTATCAGCAGAGAAGTCACATCAAAAACGGCTCCAGAAGCTCCTTGATTACATGGATTGTGTGAATCAGCTAAACGAGGCTATTAACTCCATATGCCAAGAGGTTGAGCCAATTATTCAGAAGCTTCAGGAGGTGGTGGAGTTTATAAGCAGAACAAAGGCAGCTGATCAGTACAGAACACAAAGGTTAAGAGAGGCACTTGTCACTCTCAAGGCACTTTATGAAACCGAGGTGGATGAGATGAGGTTCGAGGGTATGCTGGATCAGGCGTTGCTTCATATGCAGGATGAGTTTGAGGCTCTCTTACTGAAAATGAAACATAGGAACCTAGGAGTTATGTCACACAAACATGCTGGTGGTAATGACATTGATCATGTCAAGGTTTGCCCTGAATTAGGATCAGAGCTGGAAATTGAAGTCATGCGACGAATTTCAACCATTCTTGCTACCAACGATTGCCTAGATATATGCATTGACATCTATGTTAAGGTGAGATATAGAAGGGCTGCCAAAGCATTAATGAAGCTAAGCCCTGATTACTTGAGAACATATACCCCAGAAGGAATTGATGAAATGGAGTGGGAAAACTTAGAGACAGCGATAACCCTCTGGGTCCAACACCTAGAAGTTGCTGCAAAGAAGGTTCTGTTGTCAGAAAAGAGACTCTGCGAAAGAGTTTTGGGTGAAATAATGGATGGACTAGTCTGGCCAGAATGCTTTGTGAAAATATCAGACAAGATCATGGCTGTGTTCTTTCGGTTTGGAGAAGGTGTTGCCAGAAGCAGAAAAGAGCCTCAGAAGCTGTTCAAACTGTTGGACATGTTCGAATCCTTGGAGAAACTCAAACCCCATGTCTTGGAAATCTTTGATGGTGAAGCTGGAGTGGATATCTGTACACGGTTCAGAGAGCTTGAAAAGCTCATCATCGATGCTTCAAGCAAAGTTTTCTGGGAATTTGGCCTTCAAATTGAAGGGAATGCTGATGGTCTTCCACCCCCACAAGATGGTTCTGTTCCAAAACTCGTAAGATACGCTATTAACTACCTCAAATACCTTGCCACGGTGAATTACAGAACAACCATGGCTAAGGTTCTTCGAACAGAACAGATATGGAAAGGTGGGGTGTTATCCAAACCCGAGACAGATGAGAGTTTATTGAAGCATGCAATTTCCAATATCATGGAGGCTCTTCAAAGAAACATCGAGTCTAAACGTTCTAGTTGCAGGGACAGAATTTTGATCCATATATTCATGATGAACACATACTGGTACATGTATATGAGAACCAAGAACACAGAGCTTGGTGAGTTGTTAGGTGAGCAATACATGAAAGATGGTTACAAGGCAGTGGCAGAAGAATCTGCTTACATGTACCAGAAGCAAGCGTGGGGTGTTTTGGTGAGGATTTTGGATGCAGAGGATCTGAGGGAACAAGGGAAAGAAAGCATTGGAAGGCTAGTGACAGAGAAGATTGAGACTTTCTTCAAGTGTTTAGATGAGATTTGTGAGAGGCATAGAGTGTGTTATAGTATACCAGATGTTGATTTGAGGGAACAAATGAGAGAAGCTACAATGAAGCTTGTGGTGCCGGCTTATGCAGAGTTCTTGGAGTCTTATTCAGGATTGTTGCAGAGGAAAGTGTATCCGAGTCCTGAAAGGTTACAAGGGTTGTTGAGAAAGGCTTTTGATGGTGCTGATGTGAGGTTGAAGCGGCGAAGCTCTACTTCTAATGATTGGAATGGTGGACGCAACTCTGCCTCCATGGAAGGTGATAACAGGCAGTCCAGATGA 2106 0.4349 MALVVAPEDAAALVNLESAYSDVEALLRASEEMEDNLETMETRFNLKQGSLSTASRRIAPLQSLAMSRKALDTRINRAISPALALLDMFKLTESLQNNLTDLSSKLSAEKSHQKRLQKLLDYMDCVNQLNEAINSICQEVEPIIQKLQEVVEFISRTKAADQYRTQRLREALVTLKALYETEVDEMRFEGMLDQALLHMQDEFEALLLKMKHRNLGVMSHKHAGGNDIDHVKVCPELGSELEIEVMRRISTILATNDCLDICIDIYVKVRYRRAAKALMKLSPDYLRTYTPEGIDEMEWENLETAITLWVQHLEVAAKKVLLSEKRLCERVLGEIMDGLVWPECFVKISDKIMAVFFRFGEGVARSRKEPQKLFKLLDMFESLEKLKPHVLEIFDGEAGVDICTRFRELEKLIIDASSKVFWEFGLQIEGNADGLPPPQDGSVPKLVRYAINYLKYLATVNYRTTMAKVLRTEQIWKGGVLSKPETDESLLKHAISNIMEALQRNIESKRSSCRDRILIHIFMMNTYWYMYMRTKNTELGELLGEQYMKDGYKAVAEESAYMYQKQAWGVLVRILDAEDLREQGKESIGRLVTEKIETFFKCLDEICERHRVCYSIPDVDLREQMREATMKLVVPAYAEFLESYSGLLQRKVYPSPERLQGLLRKAFDGADVRLKRRSSTSNDWNGGRNSASMEGDNRQSR. 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03622 701 Coils Coil 13 43 - -
Seca7g03622 701 MobiDBLite consensus disorder prediction 678 701 - -
Seca7g03622 701 PANTHER EXOCYST COMPLEX PROTEIN EXO70 131 668 IPR004140 GO:0000145|GO:0006887
Seca7g03622 701 SUPERFAMILY Cullin repeat-like 119 668 IPR016159 -
Seca7g03622 701 MobiDBLite consensus disorder prediction 679 701 - -
Seca7g03622 701 Pfam Exo70 exocyst complex subunit 309 663 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca7g03622 701 Gene3D Exocyst complex component Exo70 157 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03622 Seca-Chr7 109150460 109153577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03622 43 655 EXO70 exocyst subunit family AT4G31540 29.952 1.40e-77 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03622 - - aip:107605596 1073.15