Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03610 ATGGCGGTGTTGTCAGAAGTGATGGAGGATGATGAACTTGACGAAGAGCCAGGCGAGGTCATCGAATCGGCACCGCCCCAGAAGGTCGGCGAAGAGAGGCAACTCGGTAGTAACTCCTCTCTCAAAAAGAAGCTCCTAAAAAACGGACATGGATGGGAAACCCCCGACTTCAACGACCAAGTTACTGTTCACTACGTCGGAACTTCACCTAATGGAACAAAGTTCGATTCCACTAGGGATTCAGATCAACCTCTGACATTCACTCTTGGTCAAGGTAAAGTGTATGCTGGGTTGGATCATGGGATTATCACCATGAAGAAGGGAGAGGTGGCATTGTTCACGTTACCTGCTGAGTCTGGAGGAGTTCCACATGACTCCAACTCGGTTGTGCAGTTTGAGGTGGAACTCATTTCGTGGATCAAGGTGGTGGATGTTTGCAAAGATGGTGGAATTATCAAGAAAATTATGGAGAAGGGGAAAGGGAATGAGCGGCCTGGTGATCAAGATGAAGTCCTTGTGAAGTATCAGGTGGCACTAGTTGATGGTACTGTTGTTGCAGAAACACCAGAAGCAGGAGTTGAATTTCATGTGAAGGATGGTATTATTGTTGAGTTGTACTCTTATTTTATTCAGCATGAACAAAGAATATAA 651 0.4578 MAVLSEVMEDDELDEEPGEVIESAPPQKVGEERQLGSNSSLKKKLLKNGHGWETPDFNDQVTVHYVGTSPNGTKFDSTRDSDQPLTFTLGQGKVYAGLDHGIITMKKGEVALFTLPAESGGVPHDSNSVVQFEVELISWIKVVDVCKDGGIIKKIMEKGKGNERPGDQDEVLVKYQVALVDGTVVAETPEAGVEFHVKDGIIVELYSYFIQHEQRI. 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03610 216 SUPERFAMILY FKBP-like 37 147 - -
Seca7g03610 216 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 24 143 - -
Seca7g03610 216 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 54 137 IPR001179 GO:0003755
Seca7g03610 216 Gene3D - 32 142 IPR046357 GO:0003755
Seca7g03610 216 SUPERFAMILY FKBP-like 144 207 - -
Seca7g03610 216 Gene3D - 143 211 IPR046357 GO:0003755
Seca7g03610 216 MobiDBLite consensus disorder prediction 1 41 - -
Seca7g03610 216 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 58 146 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03610 Seca-Chr7 108745122 108746256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03610 28 200 Calmodulin-binding Proteins AT3G25230 55.866 1.24e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03610 K09571 - ming:122073131 266.929