Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03583 ATGGATCTTGGGGTGGTGGGTTTAGATGGGTTGGTGGGTTCAGACACTAGTGGGTATGTTTCTCTTGGTTCTTCAGATCCTGAACCAAAGCACAAATGGTACGGATCTGGGTTACTTAAGCAAGAGAGATCTGCAGGAGGCACCACTGATGATGATGACTTGAGAAGCTCCAAAATGGCCAAGACTGAAGCAATGCTGAGAAACTCTTCAGTTCTGAGATCTAATGCCACTCTGTTTTCTTCTGATGGGTATCACCAACAGCAAATGCTGAGCTTCTCTTCTCCAAAATCAGAGACTTTGTTAGTAGACAAGGCATCCCCAAATGCCACATTGCCTTATTCTTACACCCCATTGTCTAGTTACAGCAGAAACACAGGTTACAGTTCCGGAAACATGCATGGGGCTTTTACTGGTTCCAGAGGACCATTCACTCCGTCTCAATGGATGGAACTGGAACACCAAGCTTTGATCTACAAATACATCACAGCAAACGTGCCTGTTCCTTCACATCTTCTAATCCCCATCAGAAAAGCACTTGATTCTGCTGGCTTCTGCAATTTCTCAAACGGACTCCTCAGACCCAATGCATTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAACACTGATCCTGAACCAGGAAGGTGTAGGAGAACAGATGGGAAAAAATGGCGGTGCTCAAGAGATGCCGTTGTGGATCAGAAATATTGTGAGCGGCATATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTTACCGGAACCACCACCAATACTAGTACTACTACTAGTAACCCAAATGGTTCTAAGCTCAATGCTAATAATGCTTCTCCTTCTATTGTGGTTCCTCGCAACAACAGTGCATCCAACAACCTCACTTTTGCACACCAGGAAACCAAGAATATGCATCATCCTCTTGCACCTGATAATACTTCTGCCTCCAACACCATCAACAGGATGTTTATGAATAACAAAGAGAATAATAACGTGAGTGAGAGGATGCAAGATGGTCCTGCCCTTCCAATGCTGCCTCCAACTCTTGAGCTGAAACCAAAGGAAAATCCCTTTATGATTCACAAACAGGAAATGCCATATGATGAATCCTCAAGGAATAATAATAATGAGTTTGGGCTTGTCACTTCTGATTCCCTTCTTAACCCTTCACAGAAAAACTCCACCTTTCTGGGTGGCAGAACCTTTGGTTCTTCACAGAACAACCGAGACACTAATGGGTCCCAACATTCCCTTAGGCATTTCATTGATGACTGTCCCAAACCACAGTCCAATCATCGTTCATGGCCAGACCTTGACATGCAGTCATCAGATAGGACCCAACTATCAATCTCCATCCCAATGACATCCTCAGACTTCATGTCATTCACTTCCTCACCCACCAATGAAAAGCTCACATTGTCACCTCTTAGGCTATCAAGGGAATTAGACCCAATTCAAATGGGTTTAGGTGTGGGAAGTGCTCTGAATGAATCAAACAACACCACCACTAGGCAAGCTAATTGGATCCCAATTACTTGGGAGAGTTCCATGGGTGGTCCACTTGGGGAGGTTCTGAATCTTAGTATTAACAATGCAAGTGATCAGTGTGTGAAGAACTCTTCTGCTCTCAATCTCATGACTGATGGGTGGGACAATAGTCCTCCACTAGGGTCATCCCCAACTGGGGTCCTGCAAAAGACAGCATTTGGGTCACTTTCCAATAGCAGTGCTGGGAGCAGTCCAAGGGCAGAGAACAACAAGACTCAAGAAGGGGCCAGCTTGTGCAATGACCTCTTGGGATCAACTCTTGGGAATGCTTCCTCCTTACCTGCATTGTAA 1860 0.4559 MDLGVVGLDGLVGSDTSGYVSLGSSDPEPKHKWYGSGLLKQERSAGGTTDDDDLRSSKMAKTEAMLRNSSVLRSNATLFSSDGYHQQQMLSFSSPKSETLLVDKASPNATLPYSYTPLSSYSRNTGYSSGNMHGAFTGSRGPFTPSQWMELEHQALIYKYITANVPVPSHLLIPIRKALDSAGFCNFSNGLLRPNALGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTGTTTNTSTTTSNPNGSKLNANNASPSIVVPRNNSASNNLTFAHQETKNMHHPLAPDNTSASNTINRMFMNNKENNNVSERMQDGPALPMLPPTLELKPKENPFMIHKQEMPYDESSRNNNNEFGLVTSDSLLNPSQKNSTFLGGRTFGSSQNNRDTNGSQHSLRHFIDDCPKPQSNHRSWPDLDMQSSDRTQLSISIPMTSSDFMSFTSSPTNEKLTLSPLRLSRELDPIQMGLGVGSALNESNNTTTRQANWIPITWESSMGGPLGEVLNLSINNASDQCVKNSSALNLMTDGWDNSPPLGSSPTGVLQKTAFGSLSNSSAGSSPRAENNKTQEGASLCNDLLGSTLGNASSLPAL. 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03583 619 Pfam WRC 212 254 IPR014977 -
Seca7g03583 619 SMART QLQ_2 141 177 IPR014978 GO:0005524|GO:0005634|GO:0006355
Seca7g03583 619 Pfam QLQ 142 176 IPR014978 GO:0005524|GO:0005634|GO:0006355
Seca7g03583 619 MobiDBLite consensus disorder prediction 20 56 - -
Seca7g03583 619 ProSiteProfiles WRC domain profile. 211 255 IPR014977 -
Seca7g03583 619 PANTHER GROWTH-REGULATING FACTOR 5 86 465 IPR031137 GO:0005634|GO:0006351|GO:0032502
Seca7g03583 619 ProSiteProfiles QLQ domain profile. 142 177 IPR014978 GO:0005524|GO:0005634|GO:0006355
Seca7g03583 619 MobiDBLite consensus disorder prediction 577 597 - -
Seca7g03583 619 MobiDBLite consensus disorder prediction 239 296 - -
Seca7g03583 619 MobiDBLite consensus disorder prediction 258 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03583 Seca-Chr7 108147023 108151127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03583 1 577 GRF Transcription Factor Family AT2G22840 41.060 1.13e-101 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Seca7g03583 WRC 5.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03583 - - cam:101496763 818.92