Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03513 ATGGGTACCTGCATATCCGTTGCATCCCCAGAGATTCATGGGGTCCCTGAAGAAGTTCATGATGAGAATGTGATAATATTTGAAACAAGCAAGGTTCTAAATGGGAGTAAGAGACTTTGCTCTGTTTACTCTAAACAAGGTAGCAAAGGACTCAATCAAGATGCTGCCTCTCTTCACCAGGGTTATGGGATGGGAAATGGAGCATTTTGTGGTGTCTATGATGGACATGGATGGAATGGACACATAGTGAGCAAACTAGTAAACAGTCGTTTGCCTTCTCTCATACTGAGCCAAAAGAGTGCTTTTGCAGAGTTTGATAAGATAGAGAATGGTTATTACAACACCCCAAACTATATTGGCACAGCAGAAGATGACTTGGCTTCAGAGAATTTTCATAAATGGAAAAAAGCCATTATTAGTGCTTTCAGGGTGATGGACAAGGAGGTGAAACTACAAAAGAATCTAGACTGCTCTTGCAGTGGAACTACTGCTGTAATTGTCATTAGACAGGATGAAGGTCTTATCATAGCTAATCTTGGTGACTCAAGAGCAGTCTTGGGGACAATCTATGATGAAAAACTCCAAGCCATTCAATTGACCACTGATTTGAAACCTGAATTACCTCGCGAAGCAGATAGAATAAGGAGGTACCAAGGTTGTGTGTATGCGATTAAGGAAGAACCACATGTGCAGCGAGTGTGGGCACCCAACAATGAGAACTCCCCTGGTCTAGCCATGTCTCGAGCTTTTGGAGATTTCATTCTCAAAGACTATGGTGTTATTGCCACCCCAGATATTAGCTATCACCCTCTTACATCAAATGACCAATTTATTGTTCTTGCAACTGATGGGGTATGTGTGTGGGATGTACTGAGTAACGATGAGGTTGCATCAATTGTGTGGATGGTGGACACTGAAGAGGAAGCGGCAAGAGCAGTAATAGAAGCAGCCACTGCTGCATGGAAAAAGAAGTATCCTTCCTCTAAGGTAGATGACTGCACCGTGGTTTGCCTTTTCCTGCAGAAGAAACCACAAAACTTGGGGCTTATGAAAAGTGGAGAATTAGGTTAA 1071 0.4267 MGTCISVASPEIHGVPEEVHDENVIIFETSKVLNGSKRLCSVYSKQGSKGLNQDAASLHQGYGMGNGAFCGVYDGHGWNGHIVSKLVNSRLPSLILSQKSAFAEFDKIENGYYNTPNYIGTAEDDLASENFHKWKKAIISAFRVMDKEVKLQKNLDCSCSGTTAVIVIRQDEGLIIANLGDSRAVLGTIYDEKLQAIQLTTDLKPELPREADRIRRYQGCVYAIKEEPHVQRVWAPNNENSPGLAMSRAFGDFILKDYGVIATPDISYHPLTSNDQFIVLATDGVCVWDVLSNDEVASIVWMVDTEEEAARAVIEAATAAWKKKYPSSKVDDCTVVCLFLQKKPQNLGLMKSGELG. 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03513 356 SUPERFAMILY PP2C-like 23 341 IPR036457 -
Seca7g03513 356 CDD PP2Cc 38 340 IPR001932 -
Seca7g03513 356 Pfam Protein phosphatase 2C 67 319 IPR001932 -
Seca7g03513 356 ProSiteProfiles PPM-type phosphatase domain profile. 39 340 IPR001932 -
Seca7g03513 356 Gene3D - 22 343 IPR036457 -
Seca7g03513 356 PANTHER PROTEIN PHOSPHATASE 40 338 IPR015655 GO:0004722|GO:0006470
Seca7g03513 356 SMART PP2C_4 29 338 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03513 Seca-Chr7 106053074 106055353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03513 1 345 PP2C-type Phosphatase Gene Family AT5G26010 51.420 1.82e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03513 - - gmx:100815312 496.123