Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03484 ATGACCATTACTGATGAAGAAGTTGAAGAAAGTAGTGATGAGGAGGACAATAATCCTTGTGTTGAAACAGATGGTGAATATAGTGGTGATGGAATGGAACGTGCTAATATGGAAGAAGCTATTAATATAGATAGTTTGCATGATATTCGTAATTTGAATTTGAAGAATATTAGCCCCGAAGATGTAAAGCGGTATGATTTTGCTAACATGAGCCTTGCATATGAGTTCTATTCTGAATATGCAAAAGTGAACGGATTTTTTGTGAGAAAAAGCAAGGTGATTAAAAACTCTACAAAGGATATTGTGCAAAAAACTTTCCTTTGTTATAAGGAAGGGGAAAGGGATAAAAAGAGGCAAATCAGTAAACTTAAGCGTGAAGCAAAACGTGAAACAAGGTGTGGTTGTAAAGCAAGACTTCGAGTCCATGTTGACATCAATTCTGGTCGTTGGTATGTGACAATTTTTGATCATTTACACAACCATGAGATGCTAGGTGAAAGGCTTTGTGTCATGTTGCCAGCCCATAGGAAAATGAGTCCAACAGATATAATGGAAATGAACAGCTTGAGAAATGTTGGGATAAGCACACCTGATATCTATCATGCATTTGCAAGTCAATCAGGGAGATACCATAAGATTGGATTTCGAAAAAAAGACTTGTATAATCAGATTGGTAGATAG 681 0.3627 MTITDEEVEESSDEEDNNPCVETDGEYSGDGMERANMEEAINIDSLHDIRNLNLKNISPEDVKRYDFANMSLAYEFYSEYAKVNGFFVRKSKVIKNSTKDIVQKTFLCYKEGERDKKRQISKLKREAKRETRCGCKARLRVHVDINSGRWYVTIFDHLHNHEMLGERLCVMLPAHRKMSPTDIMEMNSLRNVGISTPDIYHAFASQSGRYHKIGFRKKDLYNQIGR. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03484 226 MobiDBLite consensus disorder prediction 1 21 - -
Seca7g03484 226 Pfam FAR1 DNA-binding domain 75 163 IPR004330 -
Seca7g03484 226 Coils Coil 110 130 - -
Seca7g03484 226 MobiDBLite consensus disorder prediction 1 30 - -
Seca7g03484 226 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03484 Seca-Chr7 105278406 105279086 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g03484 FAR1 2.7e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03484 - - tpra:123913749 211.46