Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03462 ATGTTTCTATTAGAGGATCTCTGGCCACTCGACCATGCCGTTGCAAAATCTCGTCTCTTCTCAGAACCGCTTTTGCAATCTCTACGCGAATTCACGACGAACCCGAGCTGCGAAGGCAGCGATTCAGAGATGTGCCGGGACGAGTCAACGGCGTTCGTGCTGAAATTCGTGGCGATGGCGTCGATTTTGGTGGCGGGGTTTGGGGGAATCGCGATTCCGCTGTTGGGGAAACAGCGGCGGTTCCTGCGCAGCGATGGGATGGTGTTGGCGGCGGCGAAGGCGTTTGCGGCGGGGGTGATTTTAGCGACGGGGTTTGTTCACATGCTGAAGGACTCATGGGAGGCACTGAACCACCCTTGTCTACAATCTTACACGTGGTCCAAGTTTCCTTTCACCGGGTTCTTCGCTATGATGTCGGCGCTCTTCACTCTTCTGGTTGACTTTGTGGCAACGCAGTACTATGAACGCAAACAGGGGCTCGCTCGTGGCGGCGCTGAAGGTGGGAAGGTTGTTGATGTTGTTGAAGATTTGGAAGAGGAGTTGTTGGGGTCGGGAATCGTGGAAGTTAAGGAGGATGGGAAGGTGTTTGGGGAAGAGGCGAGCGGTGGAATGCACATTGTGGGGATGCATGCTCACGCGGCGCAACATAGACACTCGCACTCATGCCACGATGGCGTTAAGGAACCACAACATGGTCACTCTCACTCTCACTCTCACTCGTTCGGAGATGACGGGGGAAGTAGCGTCCGCCACGTCGTCGTTTCACAGGTAACATGCTCTTTTTTGCTCAATCTGAAACCTTCCTTTCTTTGCTTCCCTAATTCGTTATTCTCCACCACACGCACTTCTCCTCGTCAATGCGCCTTCTGCTCAGCCAATTCCACGCCTCAGGGATCTGAATCTGTTTCCATTGTGGGTGACCTCCTCCATTACCTCAACGAATCTTGGACTCACTTCCACGCCACAGCGGAAGCAAAACGACAACTGATTGTTGCCGGTTTTCACCTTCTGAACGAGAATGGAGAATGGGATCTCAAGCCTGGCGGACGCTACTTCTTCACCCGCAACATGTCCTTTTTGGTCGCTTTCACCGTCGGAGAAAAGTGA 1107 0.5339 MFLLEDLWPLDHAVAKSRLFSEPLLQSLREFTTNPSCEGSDSEMCRDESTAFVLKFVAMASILVAGFGGIAIPLLGKQRRFLRSDGMVLAAAKAFAAGVILATGFVHMLKDSWEALNHPCLQSYTWSKFPFTGFFAMMSALFTLLVDFVATQYYERKQGLARGGAEGGKVVDVVEDLEEELLGSGIVEVKEDGKVFGEEASGGMHIVGMHAHAAQHRHSHSCHDGVKEPQHGHSHSHSHSFGDDGGSSVRHVVVSQVTCSFLLNLKPSFLCFPNSLFSTTRTSPRQCAFCSANSTPQGSESVSIVGDLLHYLNESWTHFHATAEAKRQLIVAGFHLLNENGEWDLKPGGRYFFTRNMSFLVAFTVGEK. 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03462 368 Pfam Aminopeptidase I zinc metalloprotease (M18) 311 368 IPR001948 GO:0004177|GO:0006508|GO:0008270
Seca7g03462 368 PANTHER ZINC/IRON TRANSPORTER 52 255 - -
Seca7g03462 368 MobiDBLite consensus disorder prediction 218 243 - -
Seca7g03462 368 Pfam ZIP Zinc transporter 53 242 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Seca7g03462 368 SUPERFAMILY Zn-dependent exopeptidases 300 367 - -
Seca7g03462 368 Gene3D Zn peptidases 301 368 - -
Seca7g03462 368 MobiDBLite consensus disorder prediction 218 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03462 Seca-Chr7 104884802 104891974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03462 32 257 Inorganic Solute Cotransporters AT1G10970 53.275 1.81e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03462 K14709 - gmx:100812212 270.781