Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03431 ATGGGCGCATCTGGAAAATGGGTAAAAGCATTAATCGGGCTTAAGAAGCCCGACAAGGCCGTTGAACACGCGAAGGAGGGTGGTGGGAAGAGCAAGAAGTGGAGGTTATGGAAGAGTTTTTCAGGTTCAGGGGACATTGGGAGCTTCAGAGGAGGGTCTGAATCTGAAGGGTCTTATTCCCCATCAGTGGCAGCAGATGCTTTCACAGCTGCAGTGGCCACTGTGGTTCGAGCTCCACCTAAGGATTTCAAACTCCTAAGGCAGGAATGGGCCGCAACTAGAATCCAAACTGCTTTCCGCGCCTTCTTGGCACGAAGGGCATTGAGGGCTTTGAAGGGAGTGGTGAGGCTTCAAGCTCTTGTCAGGGGTAGATTGGTGAGGAAGCAGGCTGCGGTGACATTGAGGTGCATGCAGGCCCTAGTTCGTGTTCAAGCACGTGTAAGAGCTAGAAGGGTGCGAATGTCCATAGAGGGACAAGCAGTGCAGAACATGCTCAATGAGAGGCGCACCAAGGCTGAACTCTTGAAACAAGCTGAGGAAGGATGGTGTGATAGCAAAGGAACATTGGAAGATATCAAAACAAAACTACAGATGAGGCAAGAAGGAGCTTTCAAGAGAGAGAGAGCAATTGCATACTCTCTTGCCCAGAAGCAATGGAGACCAACCCCCATGTCCAATTCAAGAGCAAACACCTCGCTTTCCTCTCTCAATAATCACCACGAGATAGACAAGGCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCTAAGCCTTGGGAGAGTAGATTAATGGAACAACAAACTCATGCTGATGCCTCAGATAAGACCCCTCCACCTCCAAAGAAATGCATGGACTCTTCAAATTCCAAAACATCTGAACCATGTTCTGTCAAAGTCAGAAAGAACAATGTCACCACAAGGATTTCTGCTAAACCTCCCCATATTGGGCAAGCTACTCGTTCATCCTCAAGTCCAAGTTCTGAGAATCTATATGATGAGAGCTGTGCTTCATCTTCAATATGCACATCTACAACACCAGTATCTGGGAATGCTGCAGCATTGGCTTGTGACAGGACAGAGGATAGTAGTAACAGTAACACTAGGCCAAGTTACATGAACCTGACTGAGTCAACCAAGGCAAAGCAAAAAAACAGTAATCACTACAACAGAGCTCAAAGACAACAATCCATGGATGAGTTCCAGTTTCTCAAAAGGACAGCTGTTTTCTCTAATGGGGACTCCAATAGCACTGCTGGTTCTGACCCTTCAATCAACTATTCTAGGCCACTTTACCTACCAACTTATTTGGATAAGAGGCCACGCTGA 1332 0.4737 MGASGKWVKALIGLKKPDKAVEHAKEGGGKSKKWRLWKSFSGSGDIGSFRGGSESEGSYSPSVAADAFTAAVATVVRAPPKDFKLLRQEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNMLNERRTKAELLKQAEEGWCDSKGTLEDIKTKLQMRQEGAFKRERAIAYSLAQKQWRPTPMSNSRANTSLSSLNNHHEIDKANWGWSWLERWMAAKPWESRLMEQQTHADASDKTPPPPKKCMDSSNSKTSEPCSVKVRKNNVTTRISAKPPHIGQATRSSSSPSSENLYDESCASSSICTSTTPVSGNAAALACDRTEDSSNSNTRPSYMNLTESTKAKQKNSNHYNRAQRQQSMDEFQFLKRTAVFSNGDSNSTAGSDPSINYSRPLYLPTYLDKRPR. 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03431 443 MobiDBLite consensus disorder prediction 284 332 - -
Seca7g03431 443 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Seca7g03431 443 SMART iq_5 110 131 IPR000048 GO:0005515
Seca7g03431 443 SMART iq_5 87 109 IPR000048 GO:0005515
Seca7g03431 443 PANTHER IQ-DOMAIN 5-RELATED 1 406 - -
Seca7g03431 443 MobiDBLite consensus disorder prediction 413 443 - -
Seca7g03431 443 MobiDBLite consensus disorder prediction 360 399 - -
Seca7g03431 443 Pfam IQ calmodulin-binding motif 112 129 IPR000048 GO:0005515
Seca7g03431 443 Pfam IQ calmodulin-binding motif 90 109 IPR000048 GO:0005515
Seca7g03431 443 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
Seca7g03431 443 MobiDBLite consensus disorder prediction 266 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03431 Seca-Chr7 103842626 103846012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03431 1 443 IQD Protein Family AT2G26180 58.444 1.37e-144 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03431 - - gmx:100787102 596.66