Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03427 ATGACAACATGGAAGTTCCTCCTACCACTGATGCTGACGAGGCCCAAGAGGATCCTGATTCAGGTAAGAGGAAGTAGTACCACCGCCACTCTCAGCACCAGATACAACATATGGAAATGTTCTTCAAGGAGTACCCTCACCCATATGATAAGCAAAGGAAAGCCCTGGGCTCAACAAGAACGCCGCAAGAATGCTTTTCTGAAGGGTGAGAACGAAAAGCTTCATGCTGACAATGCTAGGTACAAGGAGGCACTGAGTCATGCTACATGCCCTACCTATAGAGGGCTCTCTGTTGGCGAAATGTCCTTTGACGAACAACACTTGAGGATTGAGAATGCCCGATTAAGAGAAGAGGATGCTGGGAACGACAGCGAAAATGATGGGAAAGCTTGTGACACTGTTCTCTTACAATCACATGCCTTCGTGCACTCTTGA 435 0.4759 MTTWKFLLPLMLTRPKRILIQVRGSSTTATLSTRYNIWKCSSRSTLTHMISKGKPWAQQERRKNAFLKGENEKLHADNARYKEALSHATCPTYRGLSVGEMSFDEQHLRIENARLREEDAGNDSENDGKACDTVLLQSHAFVHS. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03427 144 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 57 118 IPR042160 -
Seca7g03427 144 Coils Coil 57 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03427 Seca-Chr7 103769290 103770121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03427 57 118 Homeobox Transcription Factor Family AT4G04890 69.841 1.71e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03427 K09338 - dcr:108204937 92.0485