Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03409 ATGAATTTGCGCAAGGGCACCAAGGTTTGGCTCCAGGACAGGGATTTGGCTTGGGTGGCTGCTGAAGTGCTCGATTCTGATGGCAACCGTCTCCAGCTCGTAACTGATTCCGGCAAGAAGGTTTTTGCTTCGGCGGAGAAACTGTGTCCGAGAGATGCGGATGAAGAGGAGCTTGGGGGATTCGAAGATATGACGAGGTTGGCTTACTTGAATGAACCGGGGGTGTTGTACAATCTTCGCAGAAGATATGCGCTCAATGATATCTATACATACACAGGGAGCATTTTAATAGCTGTTAATCCCTTCACAAAACTTCCTCATTTGTATGATATCCATATGATGGAGCAATACAAGGGAGCTCCATTGGGTGAGCTTAGCCCACATGTTTTTGCTGTTGCTGATGCATCTTATAGAGCAATGATGAATGAAGGTAAAAGTCAATCTATCTTGGTCAGCGGTGAAAGTGGTGCTGGAAAAACTGAGACAACAAAATTGATTATGCAGTATCTGACCTTTGTTGGTGGACGAGCTGCTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCGAATCCACTTCTAGAGGCATTTGGTAATGCAAGGACTGTCAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAATTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTATTGGAAAGATCACGAGTAGTGCAGATAACGGATCCCGAAAGAAATTATCACTGCTTTTATCAGTTGTGTTCATTTGAAAGGGATGCAGAGAAGTATAAGTTAGGACATCCGAGTCACTTCCACTATTTAAATCAAAGTAAGATCTATGAACTAGATGGTGTAAGCAATGCAGAGGAATACATGAAGACGAGGAGGGCAATGGATATTGTTGGCATCGGTCATGAGGATCAGGAAGCCATATTTCGCGTCTTAGCTGCAATTTTACACTTGGGAAACATTGAATTTTCTCCTGGTAAAGAGCATGATTCGTCAGTAATAAAGGATGAAAAATCAAGATTTCATATGCAGATGGCTGCTAATCTTTTCATGTGTGACGTAGACGTACTGCTAGCAACATTGTGTACTCGCTCAATACAAACTCGAGAAGGAAGTATTGTCAAGGCCCTTGATTGCAATGCTGCTGTTGCTGGCCGAGATGCCTTGGCAAAAACTGTTTATGCTCGTTTATTTGATTGGCTTGTCGATAAGATAAATAGGTCTGTTGGGCAAGATATCAATTCCCAGATACAAATCGGAGTTTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAACAGTTTTGAGCAATTCTGCATCAATTTTGCGAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAGTATTGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTGTAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATAATTGCTCTGTTGGATGAAGCTTGCATGTTTCCAAAATCAACGCATGAAACATTCTCAACCAAGTTGTTTCAGCATTTCCGGTCTCACGCTAGGTTGGAAAGGGAAAAGTTTTCACAAACAGATTTTACAATTTCTCATTATGCTGGCAAGGTCACTTATCATACTGATACCTTTTTGGATAAAAATCGTGATTATGTGGTTGTAGAACATTGTAATCTATTGTCTTCTTCAAAATGCCCCTTTGTGTCTGGTCTTTTCCCTTTGCTACCAGAGGAATCTTCAAGATCATCATACAAGTTTTCTTCAGTAGCTTCTAGATTTAAGCAACAACTTCAAGCACTCATGGAGACCCTAAACACAACAGAGCCTCATTACATACGATGTGTGAAACCAAATTCTTTGAATCGACCACAAATATTTGAGAATGCAAGCGTCATACACCAGTTACGCTGTGGGGGCGTCCTTGAAGCTGTTCGGATAAGTCTAGCAGGGTACCCCACTCGAAGAACATACTCAGAGTTTGTGGATCGCTTTGGGTTAATAGCCCCTGAATTTATGGATGGAATTTATGATGATAAAGCTATAACGGAGAAAATTTTGCAAAAGCTCAAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTGGCGTTTTGGACTCCAAGCGTGCTGAGGTTTTGGACAATGCTGCAAAGTGTATTCAGCGCCGACTGAGGACATTTATTGCACGTAGGGATTTTATTGCAGTCAGAGATGCTGCATTTTCTCTTCAAGCATGCTGCAGGGGATACATTGCCCAAAAGATGTATGCTGCAAAAAGAGAGAACGCAGCAGCCATCTCCATTCAAAAGTATATTCGGATGTGGCTAATGAGGCATGTGTACTTGAAACTACATTCTTCCGCTATTATCATACAGTCTCATGTTCAAGGTTTCGTGACTCGCCAAAGATTCTTGCATGGAAAAGAGCATAGAGCTGCTACTTCTATTCAGGCCTGTTGGAGAATGTACAAGGTTAAGTCAGCTTTCCAGCGACATCAAGCTTCAATTGTGGCAATACAATGCCTTTGGCGGTGTAGACAAGCAAAAAGGGAGCTTCGTAGACTTAAACAAGAGGCTAATGAAACTGGTGCCCTCCGTTTAGCTAAGAATAAACTTGAGAAGCAATTGGAAGAGCTAACATGGCGTTTGCATCTTGAAAAGAAAATAAGGGTTTCTAATGAAGAGGCTAAGCAAATAGAGATTTCCAAACTTCAAAAGGTGATTGAAGCTCTGAATCTTGAATTAGATGCAGCTAAATTGGCTACAATTAATGAGTGCAACAAGAATGCAGTTCTGCAAAATCAATTGGAATTGTCAATGAAGGAAAAATCTGCTTTAAAAAGAGAGCTAGTTGCTGTGGATGAAGTACGGAGGGAAAATGCTACGTTAAAGGTTTCATTGGATGCCTTTGAAAAAAAGTACGCAGCTTTAGAGCTTCAGCTTTCAAATACTCAAAAAGGCCATGATGAAACCATTGAGAAACTAAGGGAATTTGAACAGAAGTGCTCTCAACTCGAGCAAAATGTGAAAAGCCTTGAGGAAAAGCTATTGAGTTTAGAGGATGAAAATCATGTGCTTCGTCAGAAAGCCTTAAGTGCTCCTAGGAGTAACCGCCTGGGTTATGCAAAATCACTGTCTGAAAAATACTCAAGTGCAATAGCTTCCCGCACTGAGCGAAAGCCCACATTTGAGTCACCCACACCCACAAAGCTTATTGCCCCTTATACTCTAGGCTTGTCAGACTCTCGTCGATCTAAGTTAACTGCAGAAAAGCACCAGGATAACTATGAATTCCTCTCTAGGTGTATCAAAGAAAATTTGGGATTCAAAAATGGTAAACCTCTCGCTGCTCGTATCATATACAAATGTCTTCTTCATTGGCATGCCTTTGAATCTGAGCGCACAGCCATTTTTGACTACATAATTGAAGGCATAAATGAGGTTCTAAAGGATGTTTATGTAGTTTTTTATGAGGTTTATTCATTGGAGTGTAATGTGCTTCAGGTTAGGGATGATGACGTAGTCTTGCCATATTGGCTGTCCAATACTTCTGCTCTTCTATGCCTCTTACAGAGGAACTTACGATCAAATGGCTTTTTACCTACCACTGCTCCACGTTATACTGGATCGGCTGGCTTGACCAGCAGGACTGGGCATTCTAAGTTGCATTTAGTTCTGTCTAAATTGAGAGCTGTCAATTGA 3759 0.4073 MNLRKGTKVWLQDRDLAWVAAEVLDSDGNRLQLVTDSGKKVFASAEKLCPRDADEEELGGFEDMTRLAYLNEPGVLYNLRRRYALNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGAPLGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCSFERDAEKYKLGHPSHFHYLNQSKIYELDGVSNAEEYMKTRRAMDIVGIGHEDQEAIFRVLAAILHLGNIEFSPGKEHDSSVIKDEKSRFHMQMAANLFMCDVDVLLATLCTRSIQTREGSIVKALDCNAAVAGRDALAKTVYARLFDWLVDKINRSVGQDINSQIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYCKEEINWSYIEFVDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQHFRSHARLEREKFSQTDFTISHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCPFVSGLFPLLPEESSRSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPNSLNRPQIFENASVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGIYDDKAITEKILQKLKLENFQLGRTKVFLRAGQIGVLDSKRAEVLDNAAKCIQRRLRTFIARRDFIAVRDAAFSLQACCRGYIAQKMYAAKRENAAAISIQKYIRMWLMRHVYLKLHSSAIIIQSHVQGFVTRQRFLHGKEHRAATSIQACWRMYKVKSAFQRHQASIVAIQCLWRCRQAKRELRRLKQEANETGALRLAKNKLEKQLEELTWRLHLEKKIRVSNEEAKQIEISKLQKVIEALNLELDAAKLATINECNKNAVLQNQLELSMKEKSALKRELVAVDEVRRENATLKVSLDAFEKKYAALELQLSNTQKGHDETIEKLREFEQKCSQLEQNVKSLEEKLLSLEDENHVLRQKALSAPRSNRLGYAKSLSEKYSSAIASRTERKPTFESPTPTKLIAPYTLGLSDSRRSKLTAEKHQDNYEFLSRCIKENLGFKNGKPLAARIIYKCLLHWHAFESERTAIFDYIIEGINEVLKDVYVVFYEVYSLECNVLQVRDDDVVLPYWLSNTSALLCLLQRNLRSNGFLPTTAPRYTGSAGLTSRTGHSKLHLVLSKLRAVN. 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03409 1252 ProSiteProfiles IQ motif profile. 756 784 IPR000048 GO:0005515
Seca7g03409 1252 PANTHER MYOSIN 802 1220 - -
Seca7g03409 1252 ProSiteProfiles IQ motif profile. 828 857 IPR000048 GO:0005515
Seca7g03409 1252 Gene3D - 249 306 - -
Seca7g03409 1252 SMART iq_5 827 849 IPR000048 GO:0005515
Seca7g03409 1252 SMART iq_5 754 776 IPR000048 GO:0005515
Seca7g03409 1252 SMART iq_5 731 753 IPR000048 GO:0005515
Seca7g03409 1252 SMART iq_5 850 872 IPR000048 GO:0005515
Seca7g03409 1252 SMART iq_5 779 801 IPR000048 GO:0005515
Seca7g03409 1252 SMART iq_5 802 824 IPR000048 GO:0005515
Seca7g03409 1252 Pfam Myosin head (motor domain) 62 717 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca7g03409 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 828 883 IPR027417 -
Seca7g03409 1252 ProSiteProfiles IQ motif profile. 851 880 IPR000048 GO:0005515
Seca7g03409 1252 FunFam Myosin heavy chain 249 303 - -
Seca7g03409 1252 Pfam IQ calmodulin-binding motif 734 752 IPR000048 GO:0005515
Seca7g03409 1252 Pfam IQ calmodulin-binding motif 782 800 IPR000048 GO:0005515
Seca7g03409 1252 Pfam IQ calmodulin-binding motif 829 849 IPR000048 GO:0005515
Seca7g03409 1252 Pfam IQ calmodulin-binding motif 804 823 IPR000048 GO:0005515
Seca7g03409 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 777 IPR027417 -
Seca7g03409 1252 Coils Coil 948 968 - -
Seca7g03409 1252 Gene3D Myosin VI head, motor domain, U50 subdomain 308 598 - -
Seca7g03409 1252 Gene3D - 435 620 - -
Seca7g03409 1252 ProSiteProfiles IQ motif profile. 780 806 IPR000048 GO:0005515
Seca7g03409 1252 Coils Coil 913 940 - -
Seca7g03409 1252 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Seca7g03409 1252 Gene3D - 830 879 - -
Seca7g03409 1252 Gene3D - 782 829 - -
Seca7g03409 1252 Gene3D - 731 781 - -
Seca7g03409 1252 Coils Coil 864 884 - -
Seca7g03409 1252 ProSiteProfiles Myosin motor domain profile. 59 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca7g03409 1252 Coils Coil 888 908 - -
Seca7g03409 1252 SMART MYSc_2a 53 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca7g03409 1252 Gene3D Kinesin motor domain 62 659 IPR036961 -
Seca7g03409 1252 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca7g03409 1252 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca7g03409 1252 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca7g03409 1252 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca7g03409 1252 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca7g03409 1252 ProSiteProfiles IQ motif profile. 803 832 IPR000048 GO:0005515
Seca7g03409 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 778 825 IPR027417 -
Seca7g03409 1252 Gene3D - 663 730 - -
Seca7g03409 1252 Coils Coil 972 1048 - -
Seca7g03409 1252 CDD MYSc_Myo11 73 717 IPR036018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03409 Seca-Chr7 103172099 103187167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03409 1 1242 Myosins gene family AT4G33200 69.912 0.0 1782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03409 K10357 - gmx:100790815 2185.61