Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03383 ATGTATAGGAAAAGAATGGAAAGGACACAAGACTACTTAAGGTACTGCCTTCAGATAGCACAAGAGAATGGAATACTGGACCTTATCATGCAGTATAAAGGTGAACTTCAACAATCTCCCCTCTCAATCCACACCGTTAGTTCCATTGCCAGCCCTCAAATTCCCACTCCAGCACACCACCACCCCAATGTAGCTGCCATCACCGATCAAGCCAAAATCAATGGATGGTATATTGATCCAATTGAGATTCAATTGGAAGAAAAAATTGGGCAGGGAAGTACAGCAGACATTTATAGGGGAACATGGCGTGGGTTTGATGTAGCTGTGAAGTGCATATTAGTTGAGTTTTTCCACACAAATGAAAATGGTGAGGCTTACTTCTCTCAGGAGCTTGAAACATTGTCTAGGCAACGCCACCGTTTTGTGCTTCAATTGATGGGCGCGTGCCTTGACCCTCCACACCACGCGTGGGTGGTAACTGAGTACTTTAGCACCACACTAAAAGAGTGGTTGCATGGCCCTGGCAATAGAGGGAGAGAGAGAATGGTGCCACTTCCACCTTTCAAAGACAGATTGGTGAGGGCCTTGGAAATTGCTCAAGCCATGCAATACCTTCATGAACAAAAGCCTAAGGTCATTCACCGTGATTTGAAGCCTAGTAACATTTTCTTGGATGATGCCATGCATGTTAGGGTTGCTGATTTTGGTCATGCTCGCTTTTTGGTTGATGAGGAAATGGCCCTCACAGGAGAAACAGGAACATATGTGTATATGGCACCAGAGGTGATCCGGTGTGAACCTTACAATGAAAAATGTGATGTGTACAGTTTTGGGGTCATACTGAATGAGCTACTAACAGGAAATTATCCCTATATTGAGACAGAATATGGTCCCACCAAGATTGCCATGGAAGTTGTGGAAGGTAAGCTGCGGCCTGTGCTTCCCTGTGATGATGTTGGCCAACTAAAAGAGCTCATTGACCTTATTTGCCTTTGTTGGGATGGCAATCCATCTACTCGACCATCCTTCGCAACAATCACACACAGCCTCAAAATTTATGCCAAAAAGCTTCTTCAAACTAGAGTTTAA 1089 0.4444 MYRKRMERTQDYLRYCLQIAQENGILDLIMQYKGELQQSPLSIHTVSSIASPQIPTPAHHHPNVAAITDQAKINGWYIDPIEIQLEEKIGQGSTADIYRGTWRGFDVAVKCILVEFFHTNENGEAYFSQELETLSRQRHRFVLQLMGACLDPPHHAWVVTEYFSTTLKEWLHGPGNRGRERMVPLPPFKDRLVRALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAMHVRVADFGHARFLVDEEMALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGVILNELLTGNYPYIETEYGPTKIAMEVVEGKLRPVLPCDDVGQLKELIDLICLCWDGNPSTRPSFATITHSLKIYAKKLLQTRV. 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03383 362 ProSitePatterns Protein kinases ATP-binding region signature. 89 110 IPR017441 GO:0005524
Seca7g03383 362 CDD STKc_MAP3K-like 89 350 - -
Seca7g03383 362 SMART serkin_6 83 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03383 362 Gene3D Transferase(Phosphotransferase) domain 1 185 361 - -
Seca7g03383 362 ProSiteProfiles Protein kinase domain profile. 83 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03383 362 Pfam Protein kinase domain 84 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g03383 362 SUPERFAMILY Protein kinase-like (PK-like) 70 349 IPR011009 -
Seca7g03383 362 Gene3D Phosphorylase Kinase; domain 1 71 163 - -
Seca7g03383 362 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 58 350 - -
Seca7g03383 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03383 Seca-Chr7 101866954 101868775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03383 76 350 MAP Kinase Kinase Kinase AT4G35780 37.319 3.03e-48 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Seca7g03383 Pkinase 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03383 - - gmx:100794498 637.491