Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03378 ATGGCTAAGGATCAGTTGCATGTGCTCAATGCACTTGATGTTGCCAAGACACAATGGTACCATTTCACAGCCATTGTGATTGCTGGGATGGGTTTCTTCACTGATGCCTACGATCTTTTCTGCATCTCCCTTGTGACCAAATTGCTAGGCCGCATATACTACTATGAAGGTCCCACCAAGCCTGGCTCTCTACCATCCAATGTTTCTGCTGCCATCAATGGTGTTGCATTCTGTGGAACCCTTGCAGGCCAGCTTTTCTTTGGCTGGCTTGGTGACAAAATGGGAAGGAAACGTGTATATGGGATGACCCTTATGCTCATGGTGATATGTTCACTTGCTTCTGGTCTCTCTTTTGGAAAAGACCCTAAAGCTGTTATGGCTACCCTTTGCTTCTTCCGGTTCTGGCTTGGATTTGGAATTGGTGGTGACTACCCTCTTTCAGCCACTATCATGTCTGAGTATGCCAACAAAAAGACTCGTGGAGCCTTTATTGCTGCAGTTTTTGCCATGCAAGGTTTTGGAATTTTAGCTGGTGGCATGGTTGCAATTATAGTTTCATCTGCTTTCAGAGCCAAGTACCCTGCTCCAGCATTCCAACTTGACCCAGTTTTGTCCACAGTTCCACAAGCTGATTATGTTTGGAGGATAATCTTGATGTTTGGTGCACTCCAAGCTCTTCTCACATACTATTGGAGGATGAAAATGCCTGAAACTGCAAGGTACACTGCCTTGGTTGCCAAGAATGCCAAGCAAGCAGCTGCAGATATGTCAAAAGTGCTGCAGGTTGAGATACAAGCTGAACAGGACAAAATTCAGCATCTGGAAGGACAAGGAAGGAATGATTTTGGCTTGTTCTCAACACAGTTCCTTCACCGCCATGGACTTCACTTGGTTGGAACTGCTGTTACTTGGTTCCTGTTGGACATTGCCTATTATAGTCAGAATCTTTTCCAAAAAGACATTTTTAGTGCAATTGGATGGATTGCAGAAGCTAAAACCATGAGTGCTATTGAAGAGGTTTACAAAATTGCTAGAGCACAGACCCTCATAGCCCTTTGCAGCACTGTCCCTGGATACTGGTTCACAGTGGCACTCATTGATAGAATAGGAAGGTTTGCAATCCAGTTGATGGGGTTTTTCTTCATGACAGTGTTCATGTTTGCCTTAGCCATTCCATACCACCACTGGACCATGAAGGGAAACCAAATTGGGTTTGTTGTGATGTATTCGTTCACCTTCTTCTTTGCCAATTTTGGACCAAATTCCACTACGTTTGTGGTGCCAGCAGAGATTTTCCCAGCAAGGCTAAGGTCAACATGCCATGGTATATCAGCAGCAGCAGGGAAAGCTGGGGCAATGGTAGGAGCTTTTGGCTTCTTGTATGCTCAAAATGGCATTGGAGTGAGAAATACGCTTATAATTTTGGGTGTGATTAACTTCTTGGGGATGATGTTTACATTCTTGGTGCCTGAATCTAAAGGAAAATCACTGGAGGAGATATCTGGTGAAGCTGAGGAAGAGACTACTACTGCTACAAGAGAATCAGCATTGGAAGCTGCTCTTCAAGTTTAG 1572 0.4447 MAKDQLHVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYEGPTKPGSLPSNVSAAINGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSLASGLSFGKDPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMVAIIVSSAFRAKYPAPAFQLDPVLSTVPQADYVWRIILMFGALQALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVEIQAEQDKIQHLEGQGRNDFGLFSTQFLHRHGLHLVGTAVTWFLLDIAYYSQNLFQKDIFSAIGWIAEAKTMSAIEEVYKIARAQTLIALCSTVPGYWFTVALIDRIGRFAIQLMGFFFMTVFMFALAIPYHHWTMKGNQIGFVVMYSFTFFFANFGPNSTTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFLYAQNGIGVRNTLIILGVINFLGMMFTFLVPESKGKSLEEISGEAEEETTTATRESALEAALQV. 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03378 523 Pfam Sugar (and other) transporter 25 501 IPR005828 GO:0016020|GO:0022857|GO:0055085
Seca7g03378 523 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 494 IPR020846 GO:0022857
Seca7g03378 523 FunFam Inorganic phosphate transporter 1-6 20 515 - -
Seca7g03378 523 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 498 - -
Seca7g03378 523 SUPERFAMILY MFS general substrate transporter 11 501 IPR036259 -
Seca7g03378 523 CDD MFS_PhT 25 493 - -
Seca7g03378 523 Coils Coil 257 277 - -
Seca7g03378 523 Gene3D MFS general substrate transporter like domains 270 517 IPR036259 -
Seca7g03378 523 Gene3D MFS general substrate transporter like domains 20 267 IPR036259 -
Seca7g03378 523 NCBIfam phosphate:H+ symporter 11 503 IPR004738 GO:0005315|GO:0006817|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03378 Seca-Chr7 101663946 101666738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03378 1 502 Inorganic Solute Cotransporters AT2G38940 79.457 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03378 K08176 - gmx:100792711 928.702