Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03374 ATGGGAGAAGTTAAGAGAAAATGTTCAACCATTCGCATGGGATGTCAAGCATCACTTGTTGTGTCAAAGGATAAGAAGCGAGACATGTGGGTTATAAAATCTTTTGATAATAATCATAATCATGTCATGGCAAGTCCTAAGAGTGTATCTTATTTGAGGTGTCATAGAAAAATGACTAGTGCTGCAAAAAACCTTGTTGAAAAGTTTAATGAAGAAGGTTTACCTACTAGAAAGGTTGTTGCAATGTTTAATGGAAGCGGTTTAGCTTTTTCCAATAGAGATTGTTGGAATCATATGAGAAATGTTCGACGGATGAATTTGGATGTTGGTGATGCACAAGCAGTTTTTAATTATTTAAAATTTGAGAAGGCAATTAATAATCGGTATGAGGATGAAAAAAGAGAGGACTTTGAGTCTATACATAAATCACGCATTTTAAGTATTGGCTCAAAAATTGAAGAGCATGCCGCATCAATCTACACTAGAAATGTGTTTGGAAAGTTTCATAATGAGCTTGCAAGTGTTGCCCATTTTACAAAGGAGAAAATTGAGAAAAATGGTTCACAATGTAAGTATCGAGTATCTAATTGTTTTAATACTCGAGATACATTTATTGTTGATATAGATTTAGAGTCAAAAAATGCTACATGTGGTTGCCAATATTTTGAATTCATGGGAATATTATGCAGGCACATTTTGGTAATTTTCCAAGCCAAAAATGTGATTCAAATTCCTAGCCAATATATTTTGCAACGTTGGACAAAAGAAGCCAATAAATATATGAAGGTTGGTGATCTTGATATTCAAAATCTTGAATAA 819 0.3297 MGEVKRKCSTIRMGCQASLVVSKDKKRDMWVIKSFDNNHNHVMASPKSVSYLRCHRKMTSAAKNLVEKFNEEGLPTRKVVAMFNGSGLAFSNRDCWNHMRNVRRMNLDVGDAQAVFNYLKFEKAINNRYEDEKREDFESIHKSRILSIGSKIEEHAASIYTRNVFGKFHNELASVAHFTKEKIEKNGSQCKYRVSNCFNTRDTFIVDIDLESKNATCGCQYFEFMGILCRHILVIFQAKNVIQIPSQYILQRWTKEANKYMKVGDLDIQNLE. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03374 272 Pfam FAR1 DNA-binding domain 4 43 IPR004330 -
Seca7g03374 272 Pfam SWIM zinc finger 205 240 IPR007527 GO:0008270
Seca7g03374 272 PANTHER OS01G0519700 PROTEIN 120 258 - -
Seca7g03374 272 ProSiteProfiles Zinc finger SWIM-type profile. 204 240 IPR007527 GO:0008270
Seca7g03374 272 SMART 26again6 215 242 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03374 Seca-Chr7 101631987 101633513 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g03374 FAR1 1.7e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03374 - - aprc:113859540 246.514