Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03371 ATGAGTTTAAGTCAAACCGAGGATGATTCAATTTCAGAAGCTCACGTTCAAGTCCCAGCAGAAATTGACTGGCACATGCTTGACAAATCCAAGTTCTTCTTCCTAGGTGCAGCCTTATTCTCTGCTCTATCAGCTGCACTCTACCCTGTTGTTGTATTGAAAACACGCCAACAAGTTTCCTCAGCAAAGATCTCATGCCGCAACATGTCCTCTGCCATCATGCGCTATGAAGGCTTCAGGGGATTCTACAGAGGCTTTGGCACTTCATTGATGGGAACAATCCCAGCAAGAGCACTTTACATGTCTGCACTTGAAGTCACCAAGAGCCACGTTGGCACTGCTAGTGTTCAATTGGGGTTTTCAGATACAACTTCCACTGCAATTGCTAATGCTGCTGGTGGGGTAGCTTCTGCTATGGCTGCACAATTAGTTTGGACCCCTGTTGATGTTGTGAGCCAGAGACTAATGGTTCAAGGTAGTAGTAGAAACAACAATGTGATCCATGATCTTAACTCTTACAGGAATGGTTTTGATGCTTTCAGGAAAATCCTCTGTGCAGATGGATTGAGAGGGTTGTATAGGGGATTTGGGGTTTCAATTGTGACTTATGCACCTTCTAATGCGGTTTGGTGGGCTTCTTATTCTTTGGCACATAGACTCATTTGGGGTGCTTTTGGTTGTCATATGGGTGAGACTGATTCCAAGGCAATGGTGGGGGTTCAAGGGTTGAGTGCGGTTATGGCTAGTGGAATTTCAGCAATTATGACTATGCCTCTTGACACGGTTAAGACAAGGTTGCAAGTGTTGGATGCTGAGGAGAATGGAAGAAGAAAGCCACTAACTTTTTTGGAGACAGTTAGAAATTTGATGAAGGAAGGTGGAGTCAAAGCTTGTTACAGGGGATTGGGACCAAGATGGGCTTCAATGTCCATGTCTGCAACAACCATGATTACTACCTATGAGTTCTTGAAACGAATGTCTGCTAAGAATCTAGATAGATTAAATTAA 1008 0.4395 MSLSQTEDDSISEAHVQVPAEIDWHMLDKSKFFFLGAALFSALSAALYPVVVLKTRQQVSSAKISCRNMSSAIMRYEGFRGFYRGFGTSLMGTIPARALYMSALEVTKSHVGTASVQLGFSDTTSTAIANAAGGVASAMAAQLVWTPVDVVSQRLMVQGSSRNNNVIHDLNSYRNGFDAFRKILCADGLRGLYRGFGVSIVTYAPSNAVWWASYSLAHRLIWGAFGCHMGETDSKAMVGVQGLSAVMASGISAIMTMPLDTVKTRLQVLDAEENGRRKPLTFLETVRNLMKEGGVKACYRGLGPRWASMSMSATTMITTYEFLKRMSAKNLDRLN. 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03371 335 SUPERFAMILY Mitochondrial carrier 25 323 IPR023395 -
Seca7g03371 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 220 IPR018108 -
Seca7g03371 335 Gene3D Mitochondrial carrier domain 29 333 IPR023395 -
Seca7g03371 335 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Seca7g03371 335 Pfam Mitochondrial carrier protein 241 330 IPR018108 -
Seca7g03371 335 Pfam Mitochondrial carrier protein 41 111 IPR018108 -
Seca7g03371 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 28 110 IPR018108 -
Seca7g03371 335 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 13 330 - -
Seca7g03371 335 PRINTS Mitochondrial carrier protein signature 83 101 IPR002067 GO:0055085
Seca7g03371 335 PRINTS Mitochondrial carrier protein signature 134 156 IPR002067 GO:0055085
Seca7g03371 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 236 326 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03371 Seca-Chr7 101482960 101483967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03371 15 330 Chloroplast and Mitochondria Gene Families AT5G26200 67.500 3.99e-158 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03371 K15121 - gmx:100784202 471.855