Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03362 ATGGCAGACAGAAATAATCTAAGACCACCAGATTCATCACCTGACAGTGATTTCACCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGAAATTCGATGATAATCCATGGTTACATGATGAGCCGGATTCATTTGTTTCTGAGCACGTTTCGAACCAGTTTTATCAAACCAATTACCAGCCAGGTGATTTTGGAGGAAGTGGAAGCCATGAAGGGTCTTCCAGCAGAGAGACTAGCAGTGGGCGGGAGCAGAAGGAAGTTAGAGAGAGAGTCGCATTCAAAACAAAGTCAGAGGTCGAAATACTAGATGATGGGTATAGATGGAGGAAGTATGGAAAGAAAATGGTGAAGAACAGTCCCAATCCAAGGAATTACTATAGGTGTTCAGTAGATGGATGCCCCGTAAAAAAGAGAGTTGAGAGAGATAAGGACGATGCAATGTATGTAATAACAACTTACGAAGGCATGAACACTCACCCGAGTTCTTAG 489 0.4315 MADRNNLRPPDSSPDSDFTNQWPFELSEYLKFDDNPWLHDEPDSFVSEHVSNQFYQTNYQPGDFGGSGSHEGSSSRETSSGREQKEVRERVAFKTKSEVEILDDGYRWRKYGKKMVKNSPNPRNYYRCSVDGCPVKKRVERDKDDAMYVITTYEGMNTHPSS. 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03362 162 MobiDBLite consensus disorder prediction 49 75 - -
Seca7g03362 162 Gene3D WRKY domain 89 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g03362 162 MobiDBLite consensus disorder prediction 1 20 - -
Seca7g03362 162 FunFam WRKY transcription factor 57 88 162 - -
Seca7g03362 162 SMART WRKY_cls 102 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g03362 162 ProSiteProfiles WRKY domain profile. 97 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g03362 162 MobiDBLite consensus disorder prediction 49 89 - -
Seca7g03362 162 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 60 160 IPR044810 GO:0003700
Seca7g03362 162 Pfam WRKY DNA -binding domain 103 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g03362 162 SUPERFAMILY WRKY DNA-binding domain 95 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03362 Seca-Chr7 99114691 99116630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03362 37 161 WRKY Transcription Factor Family AT5G26170 53.901 1.09e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g03362 WRKY 6.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03362 - - gmx:100796836 237.269