Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03359 ATGCGTTGCCTCAGATCCAGGCAACTCATGGTGGCTGTTCCCCTCTCCCTAGAGTTGACAAAGGGCTCCTTAGGAATGGAAAATGCCACCCTTCACATTCTAAGATCCTTTTCAATCAGAAAAGCAGGGATTTCAATGGAGGAGGTGTTGTTCGTGGTTACAGTGCCATTAAGAGTAGGTAACTCAGTCTGTGATAACCCAACCGTAGCTACCCACATGGATGTACCCAGATTTAAACTGATGGCAGATGCAGGGTCCTTATCTAATTCTGTAACTAAGGTTTCCACTGAGACGGTTGCAGGTTCCAAAGATGGTCATAATGGTGACAATTTGGAGGATGAGGTTGGTACTACAGAAGTCACACCCCCAGAACCGGATAGGGAAGGAGAAAGTCCTTTGTTGGATATGATATCTCAAAATAAAAGCACTTTTGTTGCTGGTGATGTAGCTTTAACCCAAGAAATTGAGGAGGATGATTCATTGTCATTAGAAGGTGACCAGCTTATTGATAGCTCATGTTCTCTTTCAGTAGTCAGTGAGAACAGTAGTGTATGTGGAGAAGAGTTAATCAATTCTGATGCTACTTCAGAAGTTGGGACACCATGTTCCATAGACATAGAGAAGAGCATCTGTCCTGCCAATAATGTTGCCCAGGCTAGTGATTTGGGGGAGTCAAATGTTGATGCAGATATTATGAGTGAACCCCTTGCCGTGGAAGTGAGCCTTGATGAAGAGACTGGAGTTGGATCTGGCCCAAAACCTTCTACAGTTGACCTTCAACAGCTGCCTCAGGAAAAGACAGCTGTAACAGTTGGTCGGAGTGTTTTTGAATTGGATTATACACCACTTTGGGGATTCATATCTCTGTGTGGAAGAAGACCTGAAATGGAAGATGCAGTTGCAGCTGTACCCCGATTTTTGAAAATTCCTATTCAAATGCTAATTGGTGATCGGGTAATTGATGGAATGGACAAGTGTTTTAGTCAGCAGATGACCCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAAGTATTGTCGTGATCGTATCCATTTGGCCTTGTCTGAGGAAATAGAATTTGTCAAGGAAGGTCTAATTAATGGAAGTATCAAGGATGGTTGTCAAGACCAGTGGAGAAAAGCTTTCACCAATTGTTTCTTAAAGGTTGATGCTGAAGTTGGAGGAAAAGTTAATAATGAACCTGTTGCCCCAGAAACTGTTGGCTCTACTGCTGTTGTTGCTCTTATCAGTTCATCTCATATTATAGTTGCAAATTGTGGTGATTCAAGAGCGGTTCTATGTCGTGGAAAAGAACCGATGGCATTATCAGTGGACCATAAACCAAACCGAGATGATGAATATGCAAGAATTGAGGCAGCTGGAGGAAAGGTGATACAATGGAATGGCCATCGTGTATTCGGTGTTCTTGCAATGTCCAGGTCTATTGGTGATAGATATTTGAAACCATGGATTATTCCAGAACCAGAAGTTAGGTTTCTTCCTCGAGCCAAAGATGATGAGTGTCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCATGACAAATGAAGAGGTGTGTGATCTGGCTCGGAAAAGAATACTTCTCTGGTACAAGAAAAATGGTTTGGAACTACCCTCTGAAAGAGGAGAGGGAATTGATCCTGCTGCACAAGCAGCAGCAGAGTACCTATCAAACCGTGCACTTCAGAAAGGAAGCAAAGATAACATCACTGTGATTGTGGTGGATTTGAAACCTCAAAGAAAATATAAGAGCAAGACATGA 1794 0.4303 MRCLRSRQLMVAVPLSLELTKGSLGMENATLHILRSFSIRKAGISMEEVLFVVTVPLRVGNSVCDNPTVATHMDVPRFKLMADAGSLSNSVTKVSTETVAGSKDGHNGDNLEDEVGTTEVTPPEPDREGESPLLDMISQNKSTFVAGDVALTQEIEEDDSLSLEGDQLIDSSCSLSVVSENSSVCGEELINSDATSEVGTPCSIDIEKSICPANNVAQASDLGESNVDADIMSEPLAVEVSLDEETGVGSGPKPSTVDLQQLPQEKTAVTVGRSVFELDYTPLWGFISLCGRRPEMEDAVAAVPRFLKIPIQMLIGDRVIDGMDKCFSQQMTHFFGVYDGHGGSQVAKYCRDRIHLALSEEIEFVKEGLINGSIKDGCQDQWRKAFTNCFLKVDAEVGGKVNNEPVAPETVGSTAVVALISSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVRFLPRAKDDECLILASDGLWDVMTNEEVCDLARKRILLWYKKNGLELPSERGEGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKPQRKYKSKT. 598
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03359 597 CDD PP2Cc 288 587 IPR001932 -
Seca7g03359 597 PANTHER PROTEIN PHOSPHATASE 232 587 IPR015655 GO:0004722|GO:0006470
Seca7g03359 597 FunFam Protein phosphatase 2C 16 271 597 - -
Seca7g03359 597 SUPERFAMILY PP2C-like 274 589 IPR036457 -
Seca7g03359 597 Pfam Protein phosphatase 2C 320 580 IPR001932 -
Seca7g03359 597 ProSitePatterns PPM-type phosphatase domain signature. 334 342 IPR000222 GO:0043169
Seca7g03359 597 SMART PP2C_4 273 585 IPR001932 -
Seca7g03359 597 MobiDBLite consensus disorder prediction 93 132 - -
Seca7g03359 597 Gene3D - 270 597 IPR036457 -
Seca7g03359 597 ProSiteProfiles PPM-type phosphatase domain profile. 283 587 IPR001932 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca7g03359 Seca-Chr7 98979588 98985584 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03359 145 597 PP2C-type Phosphatase Gene Family AT1G17550 53.548 1.92e-162 472
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03359 K14497 - gmx:100805281 907.901