Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03354 ATGGAAGACACGGGTAATAGGGTTAATGAGGGTGAAGCTGAAGATGCAAATAATTTGAAGTCCCCTGATGAAGAAAATGCTTGTTCTGTTGAGGATGTTACTGATGTATACAAAAGGATTTCTGAGTTAACTGATGATGACATTAGAATCCTTGAGTTCGATTCTGAACTGGATGGGTATAATTTTTATTCTGAGTATGCTAAATTCAAAGGTTTTGCGGTTAGGAAAGATGATGTTTATCGTGATCGTAATAGGTTAATTACCATGAGGCAATTAGTTTGTAACAGACGGGGGGGAAGGAGTGAGAAGCATTTAAATAGGGCTGACAGAATTAGGGAAGCTAAGGCAATTACTCGTACCAATTGTCATGCAAGGCTTCGACTGTATTTTGATAAAAACAGTGGGAAGTGGAAGGTTGGAATTTTTGAGCCAGAACACAATCATGAGCTTACTCCTTCAAATATGGTTCATTTGATGCCTGCATATCGTGGGTTGAGTGCTGCTGATAAGGCACAAGTAAATAGTCTTCACTTATATGGTGTTAGGACTTGTCATATAATGGGTTTAATAATGGGTCAGAAAGGTTGTCACTCAGATTTGGGTTTTTGTAAGAAGGACTTGTACAATCACATTGACAAGGAAAATAGGGCCAAAATACAGGATGGAGATGCTTTTGCTGCTTTGTGCTATCTTCAAGCTAAGTTTGATAGTAATCTAATGACATTCGTTAAGTTCACTACTACTGAAGATGATAGGATTGAAAACTTGTTCTGGGCTGATGTAGGAAGTAGAATTGATTATGCTTGTTTTGGTGATGTAGTCGCATTTGACACAACTTATAAAAAAAACAAGTATAATAGGCCTTTAGTAATTTTTTGTGGTTATAATCATCATGGGGAAACCACAATTTTTGGTTGTGCTCTTGTGTCTGATGAGAAGAAAGAAACTTATAAATGGGTACTTGAATCTTTTTTGGAAGCTATGTTTAATAAATTTCCTAAGGCAGTTGTTACAGACGGGGATGGTGCAATGCGTGAAGCTATAAGATCTGTGTTTCCAGATTCTATCCACATGTTGTGTTCATGGCATCTTCACCAGAATGCTTGTGAGAATGTCAAGAATCCCAAATTTTTGGAAGATTTTAAGAAGTTAATTTATGCCAATTATACTCCTGAGAAATTTGAGCAAGAGTGGGTACAAGTCATTGAGAAACATGGTCTGAGCAACAATAGGTGGGTGCTGAAGGTGTATGACCTCAAGAGAATGTGGGCTACCGCTTTTTTCAGAGATAACTTTTTTGCTGGTGTCCGGACTACCTCCATTTGTGAAGGTATTAATTCTTTTATCAAGAGATATGTACAGAGTAAAAACAGTCTCGTTGATTTTCTACACAATTTTGAAAGAGCTTTGAATGAATATAGGCACAATGAATTAGCTTCTGATTTTAAATCCTCATACACCCAGCCAGTTCTGACAACTGCTTTGGAAAAGTATGAAGTTAATGTGTGTAATGTTTACACCAGGAATAAGTTTTTTGAAATTAGAAAGCAAATTGAGAAAGTTGCTGCTTTGAATATGATTGAAAGGACTGAGGTAGGTAATGTTGTCACATTGAAGATGAATAAATTTGGAAGTCCTGATTCTGTATACCTTGTTTTGTTTGATAAGTCTGTTGGTAAGTTTGTATGTGATTGTCGGTTGTTTGAGTCATGTGGTTTACCATGTGCACCCCGTAAGAGTAAGAAAATCATGAAAAGAAGAAAATGCTCTTATTGTAAGCGTGTTGGGCATACAATCAGGACTTGTTCCAAGTTCTCAACGCGAGATCAGCTGCATACTGTAGAAGAAGAGGAGTCTTCAGTTGAGAGTGATGGAGAATCAAGAGATTTAACGGTAATGCCTTGTGATATTGAATGTTGTATGAGATTTAGTTTTCTTGTCATAAACTAA 1950 0.3682 MEDTGNRVNEGEAEDANNLKSPDEENACSVEDVTDVYKRISELTDDDIRILEFDSELDGYNFYSEYAKFKGFAVRKDDVYRDRNRLITMRQLVCNRRGGRSEKHLNRADRIREAKAITRTNCHARLRLYFDKNSGKWKVGIFEPEHNHELTPSNMVHLMPAYRGLSAADKAQVNSLHLYGVRTCHIMGLIMGQKGCHSDLGFCKKDLYNHIDKENRAKIQDGDAFAALCYLQAKFDSNLMTFVKFTTTEDDRIENLFWADVGSRIDYACFGDVVAFDTTYKKNKYNRPLVIFCGYNHHGETTIFGCALVSDEKKETYKWVLESFLEAMFNKFPKAVVTDGDGAMREAIRSVFPDSIHMLCSWHLHQNACENVKNPKFLEDFKKLIYANYTPEKFEQEWVQVIEKHGLSNNRWVLKVYDLKRMWATAFFRDNFFAGVRTTSICEGINSFIKRYVQSKNSLVDFLHNFERALNEYRHNELASDFKSSYTQPVLTTALEKYEVNVCNVYTRNKFFEIRKQIEKVAALNMIERTEVGNVVTLKMNKFGSPDSVYLVLFDKSVGKFVCDCRLFESCGLPCAPRKSKKIMKRRKCSYCKRVGHTIRTCSKFSTRDQLHTVEEEESSVESDGESRDLTVMPCDIECCMRFSFLVIN. 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03354 649 PANTHER OS01G0519700 PROTEIN 51 576 - -
Seca7g03354 649 Pfam MULE transposase domain 273 367 IPR018289 -
Seca7g03354 649 MobiDBLite consensus disorder prediction 1 25 - -
Seca7g03354 649 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03354 Seca-Chr7 98816831 98818780 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g03354 MULE 8.4e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03354 - - tpra:123910662 667.922