Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g03353 | ATGTCTTCCCATGATGGCACCGCCACCGTAAACGTCATCATGGTGGCTGTAGACAAAGACAAAAACAGTGCTCACGCCTTCCGTTGGGCAATGAATCATGTTGATAACCCAATCATCATTGCAGTTCATGTTAAGCACAAAAACATTCTCCATCAGGGCACCAATGTTTTTCCTCCTGACGAAGACGATGTGGCTAATATTTTCGATCCCTTGCGTCAAATGTGTCTTCGTAAAGTCGTTAAGATGAAAGAAGCCGTAATCGATGATAGCGATGTTGTTGGGGGAATTTTGGAATATGCACAGAGAAATCACATCCCAACTATCGTTGTTGGTGCAGCCTCCTCCGCGACCAAGAACACTCTTCTGGCAAGGTCTCTAAACATGAGGATTGGAAGCAAAAAATTTAAAGGCCTTGATGTGTCAACGGCCATAATCAAAGCGGCCCCAGATTTTAGTTCTGTGTATGTAATTTCCAAAGGGAAGATAGTGAGATCTCGACCAGCAATGAGCCAGTTGGGAAATGTGGCTGCACAACCAAAACAACCATTTGGACTTACACATAGTGGATCAGAAAATGCAGCAAGGACACAAGCATTTAGAAGAGGGAGCACCAATAGTAGATTTGAAAGATCACCTCTACATGAGAGGCCAAGGATTTCTTCAGCTAGTCAGTCAATGGAGTACATTGATCTATCCATTAGTGGACAGAGGTCACCCTTATTTAGCCGTAACTCAAGCTCAGGTGGAAGTGACTCTTCAAGGTCATATAAGTTTGGTTCACCAGATGTAACTAAAAAGGATTCTGATTTAACCTTAAAATCAGAATCCCAACCCTCTGGAGATATGGAAGCTGAGATGAAAAGATTGAGGCTCCAATTGAAGCAAACTATGGACATGTACAGTGCAGCTTGCAAAGAGGCAATCTCAGCCCAAAACAAGGCTAAAGAGATTAATCAGTGGAAACTAGAAGAGACACGTAAGGTTGAGGAAGTTAGGTTGTCTAAAGAGGCAGCTCTTGCACAGGCAGAAGAGGAGAAGGCTAAAGCCAAAGCTGCCTTCAAAGCAGCTGAGGAAGCCATGAAAATGGCGGAAAAGGAAGCACAAATAAGATTGCATGCAGAGATGCAGGCTAGGAGACAGGCAGAAGAGAAGGATAAGTCATTAACTGTGTGGGCTCATAAGGATATTCGATATAGAAAATACACCATAGATGAAATTGAAACGGCTACTAAAAATTTCTCCCTATCAATGAAAATAGGTGAAGGTGGATTTGGACCTGTGTTTAAAGGCCATCTTGATCATACCCCAGTTGCAATCAAAATATTAAACCCTGAAGCATCCCAGGGAAGGAAGCAGTTCCAACAAGAGGTTGAGGTATTATCCAGTATAAGGCATCCTAATATGGTCCTCCTGCTTGGTGCATGTCCTGACTATGGATGCTTGGTGTATGAATACATGGAAAATGGTAGTTTAGAAGATAGATTATTGCGAAAAAATAACAGTCCCCCTATTCCATGGAGGAAACGTTTTGAAATAGCTGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAACAAAGCCAGAGCCTATTGTGCACAGGGACCTTAAACCAGCAAACATACTCTTGGATCGAAATTTTGTGAGTAAAATAAGCGATGTTGGTCTTGCACGACTAGTCCCACCATCTGTAGCTGATTCTGTCACACAATATTACATGACTTCAGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTACCAACAAACAGGGAAGTTAACAACAAAATCAGATATATATTCTTTGGGGATAATGCTACTGCAGATAATCACAGTCAAGCCTCCTATGGGGCTTGCTCATCATGTCAGGAGGGCAATTGAAAATGGAAGTTTTTCAGATATGCTTGATCCTGTGGTGACTGATTGGCCAGTTGAAGAGGCTCTAACATTTGCCAAACTATCATTGAAATGTGCAGAGCTTAGCAAGAAGGACAGGCCTGGTCTTGCATCAGTAATAGTGCCAGAGCTTAGTCGTTTAAGAGACTTTGGGTGCACATTGCAGAATAACTGCCACATACCACGCCCTCCTACCCCTACACGAAGACCACAATCAAAGACATAA | 2121 | 0.4276 | MSSHDGTATVNVIMVAVDKDKNSAHAFRWAMNHVDNPIIIAVHVKHKNILHQGTNVFPPDEDDVANIFDPLRQMCLRKVVKMKEAVIDDSDVVGGILEYAQRNHIPTIVVGAASSATKNTLLARSLNMRIGSKKFKGLDVSTAIIKAAPDFSSVYVISKGKIVRSRPAMSQLGNVAAQPKQPFGLTHSGSENAARTQAFRRGSTNSRFERSPLHERPRISSASQSMEYIDLSISGQRSPLFSRNSSSGGSDSSRSYKFGSPDVTKKDSDLTLKSESQPSGDMEAEMKRLRLQLKQTMDMYSAACKEAISAQNKAKEINQWKLEETRKVEEVRLSKEAALAQAEEEKAKAKAAFKAAEEAMKMAEKEAQIRLHAEMQARRQAEEKDKSLTVWAHKDIRYRKYTIDEIETATKNFSLSMKIGEGGFGPVFKGHLDHTPVAIKILNPEASQGRKQFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMENGSLEDRLLRKNNSPPIPWRKRFEIAAEIATALLFLHQTKPEPIVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADSVTQYYMTSAAGTFCYIDPEYQQTGKLTTKSDIYSLGIMLLQIITVKPPMGLAHHVRRAIENGSFSDMLDPVVTDWPVEEALTFAKLSLKCAELSKKDRPGLASVIVPELSRLRDFGCTLQNNCHIPRPPTPTRRPQSKT. | 707 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g03353 | 706 | CDD | STKc_IRAK | 419 | 679 | - | - | |
Seca7g03353 | 706 | SMART | serkin_6 | 413 | 677 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g03353 | 706 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 13 | 114 | - | - | |
Seca7g03353 | 706 | MobiDBLite | consensus disorder prediction | 196 | 221 | - | - | |
Seca7g03353 | 706 | Gene3D | Phosphorylase Kinase; domain 1 | 381 | 485 | - | - | |
Seca7g03353 | 706 | Pfam | Universal stress protein family | 12 | 119 | IPR006016 | - | |
Seca7g03353 | 706 | Coils | Coil | 328 | 384 | - | - | |
Seca7g03353 | 706 | Gene3D | Transferase(Phosphotransferase) domain 1 | 486 | 686 | - | - | |
Seca7g03353 | 706 | SUPERFAMILY | Protein kinase-like (PK-like) | 394 | 672 | IPR011009 | - | |
Seca7g03353 | 706 | CDD | STK_N | 12 | 160 | - | - | |
Seca7g03353 | 706 | Gene3D | HUPs | 3 | 130 | IPR014729 | - | |
Seca7g03353 | 706 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 531 | 543 | IPR008271 | GO:0004672|GO:0006468 | |
Seca7g03353 | 706 | ProSiteProfiles | Protein kinase domain profile. | 413 | 679 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g03353 | 706 | MobiDBLite | consensus disorder prediction | 239 | 284 | - | - | |
Seca7g03353 | 706 | Pfam | Protein kinase domain | 415 | 670 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g03353 | 706 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 386 | 485 | - | - | |
Seca7g03353 | 706 | PANTHER | OS02G0152300 PROTEIN | 13 | 685 | - | - | |
Seca7g03353 | 706 | MobiDBLite | consensus disorder prediction | 239 | 259 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g03353 | Seca-Chr7 | 98811187 | 98815052 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g03353 | 82 | 691 | Receptor kinase-like Gene Family | AT5G12000 | 58.240 | 0.0 | 700 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Seca7g03353 | Pkinase | 2.5e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g03353 | - | - | gmx:100786386 | 878.241 |