Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03338 ATGTCCTCCGATTCCGTCACCGTCACCGGATGCAAAAATGGCGGTTGTTGGGGAGTGGAGAAAATGGAGAAGGGGAGGACGGGAAGTGAAGAAAGTGGAAGAGGAAGAAGAAGAAATTCGATGGAGAGATATGATGGAAAAGTTCGCAGATCTCGCCCCTCCTTTGTCACCAACAACAATGAGAACCACGTCGTCATTCCCTTCGACAACTTCTCCTTCCCCAGCGGTCACTCCTCTAGGGTTTGCTTCGTCGCCTCCGTCTTTTCCCTTTCTCACGCTTCCATCGTCGACGCCATCGCCGATCCGAACTTTCCACGTGTCGCCACACTAGTTCATCGATGGATTGGAGAAAACGAGGAGGCATTATGTTCTCAATGTCTTCTTTGGATCCTGCTTCGGTGTCCTCGAAGTTGTCTTCACCGTACGCTTTCTCAAATTCCATGTGTTGGACTTGATTGGAGGAGGCAAAAGAGAAAGGAACCTGTTGCTGATGGTTATGTCATGCCACCCACTCTTCCTTTAGATTCATCCTTGTTTAAGACACATTCCTCAGCTCCTTTTATAAGAAGTGGCTCTGGCAGTGATGTTGTGTATACACCATCTGACCCCGGTGGACTAGGCAACTCAAGGTCATGGTTTATATATGAGGAGCTAATCAAGGCCACAAATGGTTTCTCAACTCCTTCTCTTTTCCTCTTCCGTGAACTAGCTTCGTCGTTGTCCTTCTCTTTTCCTTCTCCTTGCCTTCTCCTTCCCTTCCGCGCGCGACAGTGGCCTTCTTCTCCTTCCCGTCTCCGTCCTTCTCCATCTCTGTCTTGGCCCTTCTCCTTCCCTTCTCCGTCCTTCTCCTTCTCCCTTCTCCGTCCGGTGCCGCCTCCGTCCTTCTCCTTCTCCCTTCTCCCTTCTCCTTCCGGTGCCGCCGCGTCTCCGTCTCCGTCCGTAGCAGCCGCAACAACCGCCGTCAAGGAGGAGGATAGGAATATGGATCGTTCTTGGATGTTTGCAAACCGTCTGACACATGAGTATGAGGAAGGAGTTGAAATGTTTATAAAATTTGCCATTGACCATGCAACAAACCCTAGTAGAATTCTCTGCCCTTGTACGAAGTGTTTTTGTTCTAAGCGAGTTAGTAAAACAGAGTTGAGGGACCATCTTTTCTGTTTTGGAATTGATCAGAGTTACACATGTTGGACATTTCATGGTGAGAATAGGAGTGAACAAAGTGGTATGGGAGAGAATAATGTCAATGTAGAACCAAGTGATGATGACTTTGGGACCGGGTGGGAGGATTGCGACCGAATTGATGAGATTCGAAAGGTGGTTGAAGATGACCTCAGAGGTTGTCCCCAAATATTTGATACCCTAGCCAGTGATGCTGAAAAGCCATTGTACAATGGGTGCTCCAAGTACACAAGGTTGTCAGCTGTGTTGAAGTTGTATAATTTAAAAGCAACAAATGGTTGGTCTGATAAGAGTTTCACAGAGTTACTCACCTTGTTGAAGGAGATGTTACCGGAGGACAATGTGCTACCTAACAGAACATATGAGGCAAAGAAGATGTTAAGTTCTATTGGGATGAGCTATGAGAAGATACATGCTTGTCCCAATGATTGCATTTTGTTTAGAAATGAGCATGTGTCATTAAGTGTGTGTCCTAAATGCAATTTGTCTCGTTATAAGAAAGAGACTACACCAGCAAAGGTGGTTTGGTATTTTCCCATAATACCAAGGTTTCGAAGGATGTATCGTAGTGTCATTGATGCAAGGAACTTAACTTGGCATGCAAATGAACGAATCAAGGATGGCATGTTGAGACATCCCGCTGATTCTCCGCAGTGGAGGAGGATTGATGATGAGTACCCCTCTTTTGGCGAGGAACCAAGAAATCTTCGCCTTGCTTTATCAACAGATGGAATGAATCCACATGGTATCCAATCTAGTAGTCATAGCACATGGCCGGTGGTATTGATAATATGTAATCTACCTCCATGGCTGTGTATGAAGTGGAAATACATGATGTTGTCTATGTTGATATCAGGACCCAGACAACCGGGTAATGATATAGATGTGTACTTGGCACCATTGATTGAAGACTTGAGGCTATTGTGGGATACTGGAGTAGAGGTCTATGATGGCTACAAAGAAGAATCTTTTCAGTTGAGGGCGATGCTGTTTGGAACGATAAATGATTTCCCTGCATATGGTAATTTGTCTGGCTATAGTGTAAAGGGTCAGTGTGCCTGTCCTGTTTGTGAAGAAAATACTACTTGGATGCGCTTGACTCATTGTAAGAAGAATGTATTCATGGGTCATCGTAAGTTTTTGCCTTTATCCCATCGTTACAGGGGATGGAAGAAATCATTCAATGGCAACACCGAAGAGGGTATGGCTCCTTCTCCATTGACTGGTGAGCAGTTGTGGGAAAACGTGGGTAACTTGACCAACAACTTCGGTAAACCTTTTGCCGCACAACTCATTACCGGAGAAAAAAATGTGTGCGAGAGTGTTATTGGCATGTTACTGAATGCCAAAGGCAAAACCAAGGATGGGGTAAATGCGAGATGGGACTTGTTGGCAATGGGTATAAGGAAAGAATTGGCTGTCAAAGTTCCAAAGGGTTTTTCCTCTAACATTAGAAATCTAGTATCACTAAAAGAGCAAAGATTGATAGGTGTCAAGTCTCATGATGATCATGTTCTGATGGGTCATTTGCTTCCGGTTGCAATACGCTCCATTCTTCCAAATAAAGTGCGTATTACCATTACTAAACTGTGTCATTTCTTCAGAGCTATTTGTAGTAAGGTCATTGACCCTAGGAAGATGCCCATTTTGCAAAGACAAATAGTGGTGACACTGTGTGAGCTTGAAATGTATTTTCCTCCATCTTTTTTTGACATAATGATTCATCTCACAGTTCACCTGGTTCGGGAGACTGAATTGTGTGGACCAGCTTATATGAGGTGGATGTACCCGGTTGAGCGATATATGAAGATATTAAAAGGGTATGTTAAGAATCGCAGTCTTCCTGAGGGTTGTATGGTTGAAAGGTACATAGTTGAAGAAGCTGTTGAGTTTTGTACAGAATACCTTAGTGGTGTCAACTCCATAGGGCTTACGGTCTCTAGACACAACAAAAGCTTACAATTAGGAGGGATTGGGGCAAGCAAAGTCATAAGCATTCAAAGAGAGGAATGGGTTCAAGCACACCTTTATGTCTTGCATAATGATGATGAGGTAGAGCCGTATGTTGAAATTCACAAGGAAATACTTCGGCACTCTAATCCTAATAGAGGAGACAATTGGATCACAAGAGAACACAATCGAAGCTTCATCACATGGTTTAAGTCTAGGATTTTTCATGACATGAACTACAATAATTCTTCAGTCTCTACTAGGCTTAAATTTTTAGCATATGGTCCGAGTTTTAATGTGATATCTTACAAGGCTTACATGATTAATGGCTACACTTTCTACACAAAGGACCATGATGATAGAACAACGGTTCAAAATAGTGGTGTCACTTTAATTGCCCAAGCATTGCATATGTCAAGTGCAAAAGATAGAAATCCAGTTTATGCAAATATGTCCTATTTTGGGGTCATTGATCGCATATGGGAATTAGATTATACTAACTTTCGGTTGCCTGTCTTCGGTTGTAAGTGGGTCGACAATAATAGTGGTGTTCAGGTTGACAATCTTGGCTTCATGAAAGTTAATTTTAGCAAGCAGGGTTACAAAGATGAACCATTTATCCTAGCTTCCCAGGCTCAACAAATTTTTTATGTTAGTGATCCCGCAGACAAAAATTTCTCCATAGTGATGTTAAGTAACAAATTCAATGACTCCCCAAATGTGGATGATGACCAACTGGAGGATGTTGAAGATGATTCTTTTGTTACGACAACACACATATTACAAGAGTGGAATATAAAGCGCCAACCTGTTGGACCCGGTGGCACGACACTATCTAGTTACATTGGTGCCATTGTTCGTGAAAAGGTACCAATTACAATAAGGTCATGGAGGGACGATGATTGCAAAGGATACAAGGAAATGATTTGGGAGGACATTAAGTCCGCATTTGATGTTCAAGAATGTCATAAAAGGTATATTCTTATGTTGGCTGGTAAAAGACATAGATCTTTTAGGTCCACATTATCCACTCATTTTATGCATGACGAAGATGGCAATGTCATCCCACATCCTCCTAAGAGGTATGGGGAGCTAATATCACAGGAGCAATGGGATTATTTTGTTTCCCTACGGTCACAAGAACATTTAAAGGAAATAAGTGAAAAAAACAAGGCCAGAGCTTCTAATCCTCAATACCCATATAGAGGTTCACGTAAGGGTTATGCCAGACTTGAGCAAGAACTGGAGGAAATATTGTCTCAACCTGCTGAGAGCGGTACCTCTGATGATAGACAAGTTCTTGACCAAGTTCTGAAGAAGGATGTCTATAGGGGATGTGTTCGGGGTGTGGGCTTTGCTGTATATCCCGGACAATATTATAATGCTCCTAAACCCCAACCAAATGTAGTCTCTGAAAATTATCAAGACATCCTTGCGGAATTGAGGGAAATGAAAGTCGGATACATGAACATTCAACAACAACTTGATGAAACAAGAAGAGAGCTTCAAGAAGTTAGGACAGAACGAAGTTGCAGAGATTCTACCTCTTTTAGTAGACCTGGCTTGCCTGAGGGTGTATTTCAATGTATACTGTACTTGGGAGACTCGGTGTTACGAGTAGTGGGTAAGGGACAAGCATGGAATATCCCAGGGCAGGACCTACACAATTCCCCACTTCCATCCAACTCAATTAAGGTCCTGGTTCAACTTGCTATTGAACCCCATGCGGAGCTTCCATGCCCTGACGCTTACGGGGAACTGAGCACTGTTGCTAATGCATTAGGGTGTTTCATCGCATGGCCATCTTCACATGTTGGATTGGATGCATTGCCTACACAATCTTCTGCTGCGGGGCCGCATGTGGAGACTCGTTATTCACCACACTCAACTATGCGGAAGTCTCCCGTTCGTGAATGCCCGCCAGAGGTGGTGACTTCAAAACCTGCTGCATCTACCAGAACGTCGTTGCAAACATTGGATACGTACTACTCTGAAAAGATGCAAGTAAATGGTGATGTGATTAACTGCACGATAGGTGCAGGCATTGTTAGTACTGATGAAATGATTGAATGGATCGATCCCGAATGTCTTCATTCGGTTTTGTACCGTGAGTGGTTGGATGCCACCGTGATTAATGTCTATTACAGTTATTTATATCATTCAGCCTTAGCTCCATCTTCTCGCACGGATCGATATGTTTTCATATCTCCACAAACCACCACAGCATTCAATGCGAACACCAAGCAACATAAGTTGGTGGGACCGGTGTTGTACAATAGACGCAGGCAAGACAAATTGTTTCTGCTTCCATACAATCATGCCGGCCGACATTGGATTCTTCTTGCATTGAGTCTCAATGGTTTTGGCAAGGTTTACTTTTTGGACTCTTTGCATAATCCCCCGGAACATTATGGTCCCATCAAGGATATGATTAAAAAATCTTTAAAAAAATATAGAAAGTTGAGTGGATTGCAGACACAGAATAGTATTCTACCAGATCCCACATGGTACCACATTAAGTGTCCTACCCAAACAAACAATGACGATTGTGGGCTCTTCGTAATGCGTTATATGAAGGAGATCATTGATCAAAACCAACTCATAATACCTAGAGAGGCTTCTAGCATTCCATTTGTTTTGGTTGAGAACAACGGGAGATATAACAAAAATGAAAGTGATGAAAAGGTTCTTCTAAATGGGATTGCTTATCGGCTCCAAAAAATCACAAAAGTGGCTGAGTGGCTACAGGTAGATCTTGCAACAAGGCATGGCTTGGTCGAGGTGTTTGTGATTATGTGA 5931 0.4299 MSSDSVTVTGCKNGGCWGVEKMEKGRTGSEESGRGRRRNSMERYDGKVRRSRPSFVTNNNENHVVIPFDNFSFPSGHSSRVCFVASVFSLSHASIVDAIADPNFPRVATLVHRWIGENEEALCSQCLLWILLRCPRSCLHRTLSQIPCVGLDWRRQKRKEPVADGYVMPPTLPLDSSLFKTHSSAPFIRSGSGSDVVYTPSDPGGLGNSRSWFIYEELIKATNGFSTPSLFLFRELASSLSFSFPSPCLLLPFRARQWPSSPSRLRPSPSLSWPFSFPSPSFSFSLLRPVPPPSFSFSLLPSPSGAAASPSPSVAAATTAVKEEDRNMDRSWMFANRLTHEYEEGVEMFIKFAIDHATNPSRILCPCTKCFCSKRVSKTELRDHLFCFGIDQSYTCWTFHGENRSEQSGMGENNVNVEPSDDDFGTGWEDCDRIDEIRKVVEDDLRGCPQIFDTLASDAEKPLYNGCSKYTRLSAVLKLYNLKATNGWSDKSFTELLTLLKEMLPEDNVLPNRTYEAKKMLSSIGMSYEKIHACPNDCILFRNEHVSLSVCPKCNLSRYKKETTPAKVVWYFPIIPRFRRMYRSVIDARNLTWHANERIKDGMLRHPADSPQWRRIDDEYPSFGEEPRNLRLALSTDGMNPHGIQSSSHSTWPVVLIICNLPPWLCMKWKYMMLSMLISGPRQPGNDIDVYLAPLIEDLRLLWDTGVEVYDGYKEESFQLRAMLFGTINDFPAYGNLSGYSVKGQCACPVCEENTTWMRLTHCKKNVFMGHRKFLPLSHRYRGWKKSFNGNTEEGMAPSPLTGEQLWENVGNLTNNFGKPFAAQLITGEKNVCESVIGMLLNAKGKTKDGVNARWDLLAMGIRKELAVKVPKGFSSNIRNLVSLKEQRLIGVKSHDDHVLMGHLLPVAIRSILPNKVRITITKLCHFFRAICSKVIDPRKMPILQRQIVVTLCELEMYFPPSFFDIMIHLTVHLVRETELCGPAYMRWMYPVERYMKILKGYVKNRSLPEGCMVERYIVEEAVEFCTEYLSGVNSIGLTVSRHNKSLQLGGIGASKVISIQREEWVQAHLYVLHNDDEVEPYVEIHKEILRHSNPNRGDNWITREHNRSFITWFKSRIFHDMNYNNSSVSTRLKFLAYGPSFNVISYKAYMINGYTFYTKDHDDRTTVQNSGVTLIAQALHMSSAKDRNPVYANMSYFGVIDRIWELDYTNFRLPVFGCKWVDNNSGVQVDNLGFMKVNFSKQGYKDEPFILASQAQQIFYVSDPADKNFSIVMLSNKFNDSPNVDDDQLEDVEDDSFVTTTHILQEWNIKRQPVGPGGTTLSSYIGAIVREKVPITIRSWRDDDCKGYKEMIWEDIKSAFDVQECHKRYILMLAGKRHRSFRSTLSTHFMHDEDGNVIPHPPKRYGELISQEQWDYFVSLRSQEHLKEISEKNKARASNPQYPYRGSRKGYARLEQELEEILSQPAESGTSDDRQVLDQVLKKDVYRGCVRGVGFAVYPGQYYNAPKPQPNVVSENYQDILAELREMKVGYMNIQQQLDETRRELQEVRTERSCRDSTSFSRPGLPEGVFQCILYLGDSVLRVVGKGQAWNIPGQDLHNSPLPSNSIKVLVQLAIEPHAELPCPDAYGELSTVANALGCFIAWPSSHVGLDALPTQSSAAGPHVETRYSPHSTMRKSPVRECPPEVVTSKPAASTRTSLQTLDTYYSEKMQVNGDVINCTIGAGIVSTDEMIEWIDPECLHSVLYREWLDATVINVYYSYLYHSALAPSSRTDRYVFISPQTTTAFNANTKQHKLVGPVLYNRRRQDKLFLLPYNHAGRHWILLALSLNGFGKVYFLDSLHNPPEHYGPIKDMIKKSLKKYRKLSGLQTQNSILPDPTWYHIKCPTQTNNDDCGLFVMRYMKEIIDQNQLIIPREASSIPFVLVENNGRYNKNESDEKVLLNGIAYRLQKITKVAEWLQVDLATRHGLVEVFVIM. 1977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03338 1976 Gene3D Adenoviral Proteinase; Chain A 1726 1919 - -
Seca7g03338 1976 ProSiteProfiles Ubiquitin-like protease family profile. 1726 1905 IPR003653 GO:0006508|GO:0008234
Seca7g03338 1976 Pfam Domain of unknown function (DUF4216) 1205 1273 IPR025312 -
Seca7g03338 1976 PANTHER DUF4218 DOMAIN-CONTAINING PROTEIN-RELATED 736 819 - -
Seca7g03338 1976 MobiDBLite consensus disorder prediction 24 49 - -
Seca7g03338 1976 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 48 92 IPR036938 -
Seca7g03338 1976 Pfam Domain of unknown function (DUF4218) 931 1035 IPR025452 -
Seca7g03338 1976 Pfam Transposase family tnp2 601 810 IPR004242 -
Seca7g03338 1976 Coils Coil 1525 1552 - -
Seca7g03338 1976 Pfam Ulp1 protease family, C-terminal catalytic domain 1748 1908 IPR003653 GO:0006508|GO:0008234
Seca7g03338 1976 MobiDBLite consensus disorder prediction 1660 1684 - -
Seca7g03338 1976 SUPERFAMILY Cysteine proteinases 1738 1914 IPR038765 -
Seca7g03338 1976 Pfam Transposase-associated domain 330 402 IPR029480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03338 Seca-Chr7 98189582 98203430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03338 154 231 Trihelix Transcription Factor Family AT1G26150 44.578 1.53e-11 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03338 - - soe:110786669 1142.49