Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03306 ATGGGTCAGGAAGAAACAAAGAGAAAGAAGTTTCGAACGACAACATGGAAGTTCCTCCTGCCGCTAACACTGACGAGGCCTAAGAGGATCCGGTTCAGGCAAGAGGAAGCGGTGCCACCACCACTCTCTGCACCAGATACAACATATGGAAATCGTTTTGTTTTATTTAACTGTTTTATTGTTGTTGTTGTCGTCAGGTTTTTCAAGGAGTGCCCTCACCCATATGATAAGCAAAGGAAAGACTTTGGCGATGAGCTTGGGCTCGACCCTTTGCAAATCAAGTTTTGGTTCCAGAACAAGGGTACCCAAACGAAGGCTCAACAAAAACGCCATGAGAATGCTCTTCTGAAGGGTGAGAATGAAAAGCTTCATACTGACAATGCTAGGTACAAGGAGGCACTGAGTCATGCTACATGCTCTACCTGTGGAGGGCCCTATGTTGGTGAAATTTCCTCTGACGAACAACACTAG 471 0.4586 MGQEETKRKKFRTTTWKFLLPLTLTRPKRIRFRQEEAVPPPLSAPDTTYGNRFVLFNCFIVVVVVRFFKECPHPYDKQRKDFGDELGLDPLQIKFWFQNKGTQTKAQQKRHENALLKGENEKLHTDNARYKEALSHATCSTCGGPYVGEISSDEQH. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03306 156 CDD homeodomain 66 112 IPR001356 GO:0003677
Seca7g03306 156 ProSiteProfiles 'Homeobox' domain profile. 66 107 IPR001356 GO:0003677
Seca7g03306 156 SUPERFAMILY Homeodomain-like 50 112 IPR009057 -
Seca7g03306 156 Gene3D - 2 123 - -
Seca7g03306 156 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 66 156 IPR042160 -
Seca7g03306 156 Pfam Homeodomain 66 103 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03306 Seca-Chr7 97045242 97045878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03306 67 156 Homeobox Transcription Factor Family AT4G21750 68.132 4.41e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Seca7g03306 Homeodomain 9.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03306 K09338 - csin:114321359 142.51