Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03301 ATGGAAATGTTCTTCAAGGAGTGCCCTCACCCATATGATAAGCAAAGGAAAGCCCTAGGAAATGAGCTTGAGCTGAACCCTTTGCAAATCAAGTTTTGGTCCAGAACAAGCGCTCAACAAAAATGTCGTGAGAATGCTTTTCTGAAAGGTGAGAACAAAAAGCTTTATGCTGACAATGCTAGGTACAAGGAAGCACTGAGTCACGCTACATGCCCTACCTGTGGAGGGCTCTCTATTGGCGAAATGTCCTTTGACGAACAACACTTGAGGATTGAGAATTCCTGA 285 0.4421 MEMFFKECPHPYDKQRKALGNELELNPLQIKFWSRTSAQQKCRENAFLKGENKKLYADNARYKEALSHATCPTCGGLSIGEMSFDEQHLRIENS. 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03301 94 ProSiteProfiles 'Homeobox' domain profile. 1 44 IPR001356 GO:0003677
Seca7g03301 94 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 93 IPR042160 -
Seca7g03301 94 CDD homeodomain 1 33 IPR001356 GO:0003677
Seca7g03301 94 Gene3D - 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03301 Seca-Chr7 96854919 96855415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03301 1 94 Homeobox Transcription Factor Family AT4G21750 64.000 3.84e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Seca7g03301 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03301 K09338 - tcc:18597106 132.109