Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03291 ATGGTGTCCTCCAACATTTCAACAGAAAATCTCAATCTTGTTAGTGAGTATGAATCTCCATATTTGCCACCAATCCACAATGACCTCAAAGACTATATTTCTGTGTGCAGCAATCCTATTGAGAAAAAATTGACATGTAGTGATGTGAAAGCAGATCAAAACAGATTACTTCTTAACAAGAATCATGTGGAAAATTTCTTCTTGCCATTGTTGAGGAATGATGAAAATATCAAGACAGGAATAGCAGTCACTGCCTATGATGTTGATGGTAATGAATACTCCATGATATTCAAGAAGTGGGCAGATAAGTACTATATTCTCAATGGAGGGTGGAGAGCTTTCTCCGAAAACCATGTATTAACGAATGAAGAAATCATCAAGGTGTGGATGTTTCGCGATTCTGAAACCAACAATTTATGTGTTGCTTTTAGTATCAAAAAATCATATGGTTGA 453 0.3576 MVSSNISTENLNLVSEYESPYLPPIHNDLKDYISVCSNPIEKKLTCSDVKADQNRLLLNKNHVENFFLPLLRNDENIKTGIAVTAYDVDGNEYSMIFKKWADKYYILNGGWRAFSENHVLTNEEIIKVWMFRDSETNNLCVAFSIKKSYG. 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03291 150 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 25 144 IPR005508 GO:0003677
Seca7g03291 150 SMART B3_2 40 147 IPR003340 GO:0003677
Seca7g03291 150 Gene3D - 34 148 IPR015300 -
Seca7g03291 150 CDD B3_DNA 40 136 IPR003340 GO:0003677
Seca7g03291 150 SUPERFAMILY DNA-binding pseudobarrel domain 41 139 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03291 Seca-Chr7 96583080 96583532 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03291 5 142 B3 DNA Binding Superfamily AT4G03170 38.028 1.06e-22 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03291 - - pvu:PHAVU_005G031300g 143.28