Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03277 ATGGTTGTGGTCGTCATAGTTAGTTACAATAAAAACGGTTCAGAAAATGATATAGAGGACAACAGGAAGCACCACGTGGCTTCCACAATCAAAGCAATCCAAACCCTTTTCCATCCCACAGGTTATAAGAAGGAATGTGAGGAAAGCCTCATAGCAGAGGCTGGCGACACCACTGACCCAAAAGAATTGATCAAAATCGCCTTTAATGTTACCATTAAGAAAATTGGTGACAAACTCATGGAAATAAAGCTCTTGCAAGAGGTTGAGAAGGAGCCAAGAGCCAAGATGGCACTTGACACGTGCAAGCAACTCATGGATCTTTCAATTGAGGAATTCAAGAGGTCACTTGATGAAATAGATGAGTTTGATCTCACAAATCTTGCTGAAATTGCTGGAATTGATTATTGTAGTTGA 414 0.4058 MVVVVIVSYNKNGSENDIEDNRKHHVASTIKAIQTLFHPTGYKKECEESLIAEAGDTTDPKELIKIAFNVTIKKIGDKLMEIKLLQEVEKEPRAKMALDTCKQLMDLSIEEFKRSLDEIDEFDLTNLAEIAGIDYCS. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03277 137 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 127 IPR035513 -
Seca7g03277 137 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 131 IPR035513 -
Seca7g03277 137 PANTHER PECTINESTERASE 5 123 - -
Seca7g03277 137 SMART PMEI_2 28 137 IPR006501 GO:0004857
Seca7g03277 137 CDD PMEI-like_3 35 129 - -
Seca7g03277 137 Pfam Plant invertase/pectin methylesterase inhibitor 40 122 IPR006501 GO:0004857
Seca7g03277 137 NCBIfam pectinesterase inhibitor domain 32 127 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03277 Seca-Chr7 96135580 96135993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03277 1 129 Carbohydrate Esterase AT3G05610 40.310 4.40e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03277 K01051 - gmx:100776244 186.422