Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03276 ATGGAGAGTAATGTGGATTGTGTAAGCAACAGAGATAGTGGATTAGAAGACAGTATAGAATTCAAAGAAAATGAATTTTCAAAAGGGACCAATTTTGAAGGGTTTTGTTTTGATAGTGAAAATGATTTTGTGAAAGTAGATCCTGTTGTGCTTAGTACTGATCTCATTAAGACATTTACTTTCTCGAATTTGGAAGTAGCATGTGAGTTTTATAATTGGTATGGACGGATTAAAGGGTTTTCTGGTAGAAAGGGAAAAGTTCGAAAGAATAGGGATCAAGAAATTGTAGAGAAGACTTTATTTTGTCATAGGGAAGGAAAAAGGATGAGAAAAGATGATAATGAAGAAGAGCCCATTGTGCGTGAACCAAGACCCGAGACAAGAACATGA 390 0.3513 MESNVDCVSNRDSGLEDSIEFKENEFSKGTNFEGFCFDSENDFVKVDPVVLSTDLIKTFTFSNLEVACEFYNWYGRIKGFSGRKGKVRKNRDQEIVEKTLFCHREGKRMRKDDNEEEPIVREPRPETRT. 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03276 129 Pfam FAR1 DNA-binding domain 69 128 IPR004330 -
Seca7g03276 129 MobiDBLite consensus disorder prediction 107 129 - -
Seca7g03276 129 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03276 Seca-Chr7 96134938 96135327 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g03276 FAR1 2e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03276 - K21347 mtr:11441999 76.6405