Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03265 ATGGATTCTATATGCGTCGATACTTCACTCAATCTCAACGCTGTTCCTTCTCTGCACATGCAGGATGATGTTTTGGTTGAAGAGTTGCATCGCCTAAGTTGTGAGAACAAGAGGCTGACTGAGACCCTGAGCCACATGTGTGAGAACTACCAGTCTATGCAAAAGCAATTGACCCAATTGATTAACAAGAATTTTGAGCACCCAACACGGAAGAGAAAAGCTGAGAGTGAAAATTGTAGTGTCAATATGATTGGTCTTAGAGGCAACATTAATACTGAGTGCAGCACAGTTTCTGAGGATGAGCCATTAATCAAAAGGCCCAATATCACCTCGCCCAATGTTTCCAAGGTTCTTGTGAAGACCGAAGCATCTAATACTAGCTTATATGTGATGGATGGATATCAGTGGAGGAAATATGGTCAGAAGGTCACTAGAGATAACCCCTCTCCTAGAGCTTACTTCAGGTGCTCCTATGCCCCAAGCTGCCCGGTGAAAAAGAAGGTGCAGAGAAGTTTAGAAGACCCTACTATTCTGGTTGCAACTTATGAAGGAGAGCACAATCATGTTCATCAGCGAACTGAAATTCCACTTGTGTCAGGGCAAAGTGAAGAAGCCCCTGTAGCTGTAGGATCAGGTCCTGTTTCCTCACCTAAACCCATTGTTATTCCAAGCACGTGTCCAACTATAACGCTTGACTTGGTCGACAATGTTCAAAAGTCGTCTATCCAGCAATTTCTGGTTCAACAAATGGCTACTTCTTTGACAAAGGATCCCAATTTCACAGCAGCACTTGCCACTGCTATTTCAGGAAGAATTCTAGACCAGACTTCTGTGGCCAAATGGTGA 846 0.4385 MDSICVDTSLNLNAVPSLHMQDDVLVEELHRLSCENKRLTETLSHMCENYQSMQKQLTQLINKNFEHPTRKRKAESENCSVNMIGLRGNINTECSTVSEDEPLIKRPNITSPNVSKVLVKTEASNTSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSYAPSCPVKKKVQRSLEDPTILVATYEGEHNHVHQRTEIPLVSGQSEEAPVAVGSGPVSSPKPIVIPSTCPTITLDLVDNVQKSSIQQFLVQQMATSLTKDPNFTAALATAISGRILDQTSVAKW. 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03265 281 FunFam WRKY transcription factor 40 115 192 - -
Seca7g03265 281 Pfam WRKY DNA -binding domain 132 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g03265 281 SUPERFAMILY WRKY DNA-binding domain 128 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g03265 281 Gene3D WRKY domain 113 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g03265 281 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 23 272 IPR044810 GO:0003700
Seca7g03265 281 SMART WRKY_cls 130 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g03265 281 ProSiteProfiles WRKY domain profile. 132 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03265 Seca-Chr7 95831343 95832973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03265 3 280 WRKY Transcription Factor Family AT1G80840 45.033 2.67e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g03265 WRKY 5.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03265 - - gmx:100810978 343.584