Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g03264 ATGGATGAAAAGGGAGAAACTCTTCAAGCAGAGTTACAACATGTGAGAGAGGAGAACAATACCCTAAGACTGATGCTTGAAATTCTGAGCAGAAAGTGCACAAAGCTTGAGTCACATCTTCAAGAGATCAAGGCAGAACATAAGGCTATGATCAGTTCAAATCAAATTGGCTCAGTACCTAACCTTGAAACAAGCAAAAAAGCCAGACTAGAAATTCCCACAGCAAAAAAGCCATTACAAATCTTTGTCAGAACCCACCCCAATGATAATAGTTTGATAATAAAAGATGGCCATCAATGGAGGAAGTATGGGCAAAAGGTTACTAAAGATAATGCTTCTCCTAGAGCTTACTTCAGGTGCTCCATGGCTCCCAGTTGCCCAGCCAAGAAGAAGGTGCAAAGATGCATACATGATAGGTCTATCCTTGTTGCAACTTATGATGGAGAGCACAACCATGGTGCCCTTCATGAGTCATTCAGACCATCTTCATCATCCACACCTAAAGGCTCATCAATGGCTAATAAGTTGCCTCCAACAATCATACCAAGTGACAAAGAAGCCACGAACATTGACTATGCTGGTTCTGGTTGGGCTCAAACTGATACTAAACTTTGTGAGGATGTTATGCAACAGCGTGACCATGGCACCACCAACATCAAAGTTGAAGAATATGTGAGTTCTCTAATCAAAGATCCTGACTTCACAGTAACATTAGCTGAAGCAGTTGCTCGCACCATCACTGGTCAATATGAGCAACAAGGTCTAAACCTCAATTTGGCTATTCCAGAAGAGTGA 795 0.4189 MDEKGETLQAELQHVREENNTLRLMLEILSRKCTKLESHLQEIKAEHKAMISSNQIGSVPNLETSKKARLEIPTAKKPLQIFVRTHPNDNSLIIKDGHQWRKYGQKVTKDNASPRAYFRCSMAPSCPAKKKVQRCIHDRSILVATYDGEHNHGALHESFRPSSSSTPKGSSMANKLPPTIIPSDKEATNIDYAGSGWAQTDTKLCEDVMQQRDHGTTNIKVEEYVSSLIKDPDFTVTLAEAVARTITGQYEQQGLNLNLAIPEE. 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g03264 264 ProSiteProfiles WRKY domain profile. 89 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g03264 264 SMART WRKY_cls 94 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g03264 264 Coils Coil 12 46 - -
Seca7g03264 264 MobiDBLite consensus disorder prediction 157 176 - -
Seca7g03264 264 Pfam WRKY DNA -binding domain 95 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g03264 264 Gene3D WRKY domain 80 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g03264 264 SUPERFAMILY WRKY DNA-binding domain 91 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g03264 264 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 6 249 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g03264 Seca-Chr7 95760814 95762871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g03264 66 254 WRKY Transcription Factor Family AT1G80840 41.709 1.46e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g03264 WRKY 2.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g03264 - - ccaj:109791737 398.667